Public

ckeckExperimentParentName

createAttributeList

generate the bibliographical reference of the Experiment out of the Xref having
the CvDatabase pubme

createBibRef

createConfidence

Generate and add to the given element the Xrefs of the experiment (but no
pubmed). 
The given set of

createExperimentXrefs

createNames

get the value what will be used as ID of the experiment.

getExperimentId

getInstance

DateTime

Reading from database using SQL prepared statement

This class generates cryptographically secure pseudo-random numbers. It is best
to invoke SecureRand

java.security.SecureRandom

HashSet is an implementation of a Set. All optional operations (adding and
removing) are supported. 

java.util.HashSet

Extends the javax.servlet.ServletRequest interface to provide request
information for HTTP servlets.

javax.servlet.http.HttpServletRequest

javax.swing.JLabel

javax.swing.JPanel

Reflections one-stop-shop objectReflections scans your classpath, indexes the
metadata, allows you t

org.reflections.Reflections

onCreateOptionsMenu

findViewById

runOnUiThread

/**
     * Generated an experimentDescription out of an IntAct Experiment.
     *
     * @param session
     * @param parent     the Element to which we will add the experimentDescription.
     * @param experiment the IntAct experiment that we convert to PSI.
     *
     * @return the generated experimentDescription Element.
     */

"You must give a non null UserSessionDownload."

"You must give a non null parent to build an experimentDescription."

"You must give a <experimentList> to build a "

"You must give a non null Experiment to build an experimentDescription."

//       names bibref xref hostOrganism interactionDetectionMethod participantIdentificationMethod

//       featureDetectionMethod confidenceList attributeList

// TODO what if no pubmed Xref ... no bibRef section ?

// TODO and an attributeList is now attached to the bibRef

// 7. Generating OPTIONAL interactionDetectionMethod ... mapped to Experiment.CvInteraction.

// 8. Generating OPTIONAL participantIdentificationMethod ... mapped to Experiment.CvIdentification.

// note: it was called participantDetection in PSI1

// 9. Generating OPTIONAL featureDetectionMethod...

// note: it was called featureDetection in PSI1

// actually, we have (so far) nothing like that in the IntAct Experiment object ... skip that tag.

// 11. Generating attributeList (if any)...

// 12. Attaching the newly created element to the parent...

How to use createAttributeListmethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.Experiment2xmlPSI2

Best Java code snippets using uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.Experiment2xmlPSI2.createAttributeList (Showing top 3 results out of 315)

How to use
createAttributeList
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.Experiment2xmlPSI2