Public

ckeckExperimentParentName

createAttributeList

generate the bibliographical reference of the Experiment out of the Xref having
the CvDatabase pubme

createBibRef

createConfidence

Generate and add to the given element the Xrefs of the experiment (but no
pubmed). 
The given set of

createExperimentXrefs

createNames

get the value what will be used as ID of the experiment.

getExperimentId

getInstance

DateTime

Finding current android device location

An "abstract" representation of a file system entity identified by a pathname.
The pathname may be a

java.io.File

java.lang.String

HashMap is an implementation of Map. All optional operations are supported.All
elements are permitte

java.util.HashMap

A sequence of elements supporting sequential and parallel aggregate operations.
The following exampl

java.util.stream.Stream

An interface for the creation of Connection objects which represent a connection
to a database. This

javax.sql.DataSource

org.openjdk.jmh.runner.Runner

setContentView

setRequestProperty

Return the contained value, if present, otherwise throw an exception to be
created by the provided s

orElseThrow

/**
     * Generated an experimentDescription out of an IntAct Experiment.
     *
     * @param session
     * @param parent     the Element to which we will add the experimentDescription.
     * @param experiment the IntAct experiment that we convert to PSI.
     *
     * @return the generated experimentDescription Element.
     */

"You must give a non null UserSessionDownload."

"You must give a non null parent to build an experimentDescription."

"You must give a <experimentList> to build a "

"You must give a non null Experiment to build an experimentDescription."

//       names bibref xref hostOrganism interactionDetectionMethod participantIdentificationMethod

//       featureDetectionMethod confidenceList attributeList

// TODO what if no pubmed Xref ... no bibRef section ?

// TODO and an attributeList is now attached to the bibRef

// 7. Generating OPTIONAL interactionDetectionMethod ... mapped to Experiment.CvInteraction.

// 8. Generating OPTIONAL participantIdentificationMethod ... mapped to Experiment.CvIdentification.

// note: it was called participantDetection in PSI1

// 9. Generating OPTIONAL featureDetectionMethod...

// note: it was called featureDetection in PSI1

// actually, we have (so far) nothing like that in the IntAct Experiment object ... skip that tag.

// 11. Generating attributeList (if any)...

// 12. Attaching the newly created element to the parent...

How to use createAttributeListmethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.Experiment2xmlPSI2

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How to use
createAttributeList
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.Experiment2xmlPSI2