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Participant.getHostOrganisms
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How to use
getHostOrganisms
method
in
psidev.psi.mi.xml.model.Participant

Best Java code snippets using psidev.psi.mi.xml.model.Participant.getHostOrganisms (Showing top 8 results out of 315)

origin: uk.ac.ebi.intact.dataexchange.psimi/intact-psixml-converters

if (!participant.getHostOrganisms().isEmpty()) {
  HostOrganism hostOrganism = participant.getHostOrganisms().iterator().next();
  Organism organism = new Organism();
  organism.setNcbiTaxId(hostOrganism.getNcbiTaxId());
origin: uk.ac.ebi.intact.dataexchange.psimi/intact-psixml-converters

if (!participant.getHostOrganisms().isEmpty()) {
  HostOrganism hostOrganism = participant.getHostOrganisms().iterator().next();
  Organism organism = new Organism();
  organism.setNcbiTaxId(hostOrganism.getNcbiTaxId());
origin: uk.ac.ebi.intact.dataexchange.psimi/intact-psixml-converters

hostOrganism.setTissue(organism.getTissue());
participant.getHostOrganisms().add(hostOrganism);
origin: psidev.psi.mi/psi25-xml

for ( HostOrganism ho : participant.getHostOrganisms() ) {
  if ( ho.hasExperimentRefs() ) {
    if( hasInteractionExperimentDescription  && !parentInteraction.getExperiments().isEmpty() ) {
origin: psidev.psi.mi/psi25-xml

if ( !mParticipant.getHostOrganisms().isEmpty() ) {
  if ( jParticipant.getHostOrganismList() == null ) {
    jParticipant.setHostOrganismList( new ParticipantType.HostOrganismList() );
  for ( HostOrganism mHostOrganism : mParticipant.getHostOrganisms() ) {
    jParticipant.getHostOrganismList().getHostOrganisms().add( hostOrganismConverter.toJaxb( mHostOrganism ) );
origin: psidev.psi.mi/psi25-xml

for ( psidev.psi.mi.xml254.jaxb.HostOrganism jOrganism :
    jParticipant.getHostOrganismList().getHostOrganisms() ) {
  mParticipant.getHostOrganisms().add( hostOrganismConverter.fromJaxb( jOrganism ) );
origin: psidev.psi.mi/psi25-xml

for ( ParticipantType.HostOrganismList.HostOrganism jOrganism :
    jParticipant.getHostOrganismList().getHostOrganisms() ) {
  mParticipant.getHostOrganisms().add( hostOrganismConverter.fromJaxb( jOrganism ) );
origin: psidev.psi.mi/psi25-xml

if ( !mParticipant.getHostOrganisms().isEmpty() ) {
  if ( jParticipant.getHostOrganismList() == null ) {
    jParticipant.setHostOrganismList( new HostOrganismList() );
  for ( HostOrganism mHostOrganism : mParticipant.getHostOrganisms() ) {
    jParticipant.getHostOrganismList().getHostOrganisms().add( hostOrganismConverter.toJaxb( mHostOrganism ) );
psidev.psi.mi.xml.modelParticipantgetHostOrganisms

Javadoc

Gets the value of the hostOrganismList property.

Popular methods of Participant

  • getInteractor
    Gets the value of the interactor property.
  • getExperimentalRoles
    Gets the value of the experimentalRoleList property.
  • getFeatures
    Gets the value of the featureList property.
  • getAttributes
    Gets the value of the attributeList property.
  • getBiologicalRole
    Gets the value of the biologicalRole property.
  • getExperimentalInteractors
    Gets the value of the experimentalInteractorList property.
  • getId
    Gets the value of the id property.
  • getInteraction
  • getParticipantIdentificationMethods
    Gets the value of the participantIdentificationMethodList property.
  • hasExperimentalRoles
    Check if the optional experimentalRoles is defined.
  • setBiologicalRole
    Sets the value of the biologicalRole property.
  • setInteractor
    Sets the value of the interactor property.
  • setBiologicalRole,
  • setInteractor,
  • <init>,
  • getConfidenceList,
  • getExperimentalPreparations,
  • getNames,
  • getParameters,
  • getXref,
  • hasAttributes

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