How to use
getHostOrganisms
method
in
psidev.psi.mi.xml.model.Participant

Best Java code snippets using psidev.psi.mi.xml.model.Participant.getHostOrganisms (Showing top 8 results out of 315)

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}

if (!participant.getHostOrganisms().isEmpty()) {
  HostOrganism hostOrganism = participant.getHostOrganisms().iterator().next();
  Organism organism = new Organism();
  organism.setNcbiTaxId(hostOrganism.getNcbiTaxId());

if (!participant.getHostOrganisms().isEmpty()) {
  HostOrganism hostOrganism = participant.getHostOrganisms().iterator().next();
  Organism organism = new Organism();
  organism.setNcbiTaxId(hostOrganism.getNcbiTaxId());

hostOrganism.setTissue(organism.getTissue());
participant.getHostOrganisms().add(hostOrganism);

for ( HostOrganism ho : participant.getHostOrganisms() ) {
  if ( ho.hasExperimentRefs() ) {
    if( hasInteractionExperimentDescription  && !parentInteraction.getExperiments().isEmpty() ) {

if ( !mParticipant.getHostOrganisms().isEmpty() ) {
  if ( jParticipant.getHostOrganismList() == null ) {
    jParticipant.setHostOrganismList( new ParticipantType.HostOrganismList() );
  for ( HostOrganism mHostOrganism : mParticipant.getHostOrganisms() ) {
    jParticipant.getHostOrganismList().getHostOrganisms().add( hostOrganismConverter.toJaxb( mHostOrganism ) );

for ( psidev.psi.mi.xml254.jaxb.HostOrganism jOrganism :
    jParticipant.getHostOrganismList().getHostOrganisms() ) {
  mParticipant.getHostOrganisms().add( hostOrganismConverter.fromJaxb( jOrganism ) );

for ( ParticipantType.HostOrganismList.HostOrganism jOrganism :
    jParticipant.getHostOrganismList().getHostOrganisms() ) {
  mParticipant.getHostOrganisms().add( hostOrganismConverter.fromJaxb( jOrganism ) );

if ( !mParticipant.getHostOrganisms().isEmpty() ) {
  if ( jParticipant.getHostOrganismList() == null ) {
    jParticipant.setHostOrganismList( new HostOrganismList() );
  for ( HostOrganism mHostOrganism : mParticipant.getHostOrganisms() ) {
    jParticipant.getHostOrganismList().getHostOrganisms().add( hostOrganismConverter.toJaxb( mHostOrganism ) );

Javadoc

Gets the value of the hostOrganismList property.

Popular methods of Participant

getInteractor
Gets the value of the interactor property.
getExperimentalRoles
Gets the value of the experimentalRoleList property.
getFeatures
Gets the value of the featureList property.
getAttributes
Gets the value of the attributeList property.
getBiologicalRole
Gets the value of the biologicalRole property.
getExperimentalInteractors
Gets the value of the experimentalInteractorList property.
getId
Gets the value of the id property.
getInteraction
getParticipantIdentificationMethods
Gets the value of the participantIdentificationMethodList property.
hasExperimentalRoles
Check if the optional experimentalRoles is defined.
setBiologicalRole
Sets the value of the biologicalRole property.
setInteractor
Sets the value of the interactor property.

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How to use getHostOrganismsmethodin psidev.psi.mi.xml.model.Participant

Best Java code snippets using psidev.psi.mi.xml.model.Participant.getHostOrganisms (Showing top 8 results out of 315)

How to use
getHostOrganisms
method
in
psidev.psi.mi.xml.model.Participant