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Participant.getFeatures
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How to use
getFeatures
method
in
psidev.psi.mi.xml.model.Participant

Best Java code snippets using psidev.psi.mi.xml.model.Participant.getFeatures (Showing top 11 results out of 315)

origin: org.biopax.paxtools/psimi-converter

for(Feature f : participant.getFeatures()) {
  if(exp==null || f.getExperiments().contains(exp) || f.getExperiments().isEmpty()) {
    EntityFeature feature = getFeature(ModificationFeature.class, f);			
origin: psidev.psi.mi/psimitab

if (xmlParticipant.getFeatures() != null) {
  Collection<Feature> xmlFeatures = xmlParticipant.getFeatures();
  List<psidev.psi.mi.tab.model.Feature> tabFeatures
      = new ArrayList<psidev.psi.mi.tab.model.Feature>();
origin: uk.ac.ebi.intact.dataexchange.psimi/intact-psixml-converters

for (psidev.psi.mi.xml.model.Feature psiFeature : participant.getFeatures()) {
  Feature feature = featureConverter.psiToIntact(psiFeature);
  component.addFeature(feature);
origin: uk.ac.ebi.intact.dataexchange.psimi/intact-psixml-converters

for (psidev.psi.mi.xml.model.Feature psiFeature : participant.getFeatures()) {
  Feature feature = featureConverter.psiToIntact(psiFeature);
  component.getBindingDomains().add(feature);
origin: uk.ac.ebi.intact.dataexchange.psimi/intact-psixml-converters

  featureMap.put(feature.getAc(), psiFeature);
participant.getFeatures().add(psiFeature);
origin: psidev.psi.mi/psimitab

  xmlfeature.getAttributes().add(attribute);
participant.getFeatures().add(xmlfeature);
origin: psidev.psi.mi/psi25-xml

for ( Feature feature : participant.getFeatures() ) {
  if ( feature.hasExperimentRefs() ) {
    if( hasInteractionExperimentDescription  && !parentInteraction.getExperiments().isEmpty() ) {
origin: psidev.psi.mi/psi25-xml

mParticipant.getFeatures().add( featureConverter.fromJaxb( jFeature ) );
origin: psidev.psi.mi/psi25-xml

mParticipant.getFeatures().add( featureConverter.fromJaxb( jFeature ) );
origin: psidev.psi.mi/psi25-xml

for ( Feature mFeature : mParticipant.getFeatures() ) {
  jParticipant.getFeatureList().getFeatures().add( featureConverter.toJaxb( mFeature ) );
origin: psidev.psi.mi/psi25-xml

for ( Feature mFeature : mParticipant.getFeatures() ) {
  jParticipant.getFeatureList().getFeatures().add( featureConverter.toJaxb( mFeature ) );
psidev.psi.mi.xml.modelParticipantgetFeatures

Javadoc

Gets the value of the featureList property.

Popular methods of Participant

  • getInteractor
    Gets the value of the interactor property.
  • getExperimentalRoles
    Gets the value of the experimentalRoleList property.
  • getAttributes
    Gets the value of the attributeList property.
  • getBiologicalRole
    Gets the value of the biologicalRole property.
  • getExperimentalInteractors
    Gets the value of the experimentalInteractorList property.
  • getId
    Gets the value of the id property.
  • getInteraction
  • getParticipantIdentificationMethods
    Gets the value of the participantIdentificationMethodList property.
  • hasExperimentalRoles
    Check if the optional experimentalRoles is defined.
  • setBiologicalRole
    Sets the value of the biologicalRole property.
  • setInteractor
    Sets the value of the interactor property.
  • <init>
  • setInteractor,
  • <init>,
  • getConfidenceList,
  • getExperimentalPreparations,
  • getHostOrganisms,
  • getNames,
  • getParameters,
  • getXref,
  • hasAttributes

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