- addGuessedSplits
- filterByInterval
- fixBCFSplits
- getFormat
Returns the VCFFormat corresponding to the given path. Returnsnull if it cannot
be determined even b
- getIntervals
- overlaps
- <init>
Creates a new input format, reading #TRUST_EXTS_PROPERTY from the given
Configuration.
- createRecordReader
Returns a BCFRecordReader or VCFRecordReader as appropriate, initialized with
the given parameters.T
- getSplits
Defers to BCFSplitGuesser as appropriate for each individual path. VCF paths do
not require special