intervals = VCFInputFormat.getIntervals(ctx.getConfiguration()); if (intervals != null) { overlapDetector = OverlapDetector.create(intervals);
intervals = VCFInputFormat.getIntervals(ctx.getConfiguration()); if (intervals != null) { overlapDetector = OverlapDetector.create(intervals);
private List<InputSplit> filterByInterval(List<InputSplit> splits, Configuration conf) throws IOException { List<Interval> intervals = getIntervals(conf); if (intervals == null) { return splits;
intervals = VCFInputFormat.getIntervals(ctx.getConfiguration()); if (intervals != null) { overlapDetector = new OverlapDetector<>(0, 0);
private List<InputSplit> filterByInterval(List<InputSplit> splits, Configuration conf) throws IOException { List<Interval> intervals = getIntervals(conf); if (intervals == null) { return splits;
private List<InputSplit> filterByInterval(List<InputSplit> splits, Configuration conf) throws IOException { List<Interval> intervals = getIntervals(conf); if (intervals == null) { return splits;