How to use

notifyChanged

method

in

org.openscience.cdk.AtomContainerSet

/**
 *  Called by objects to which this object has
 *  registered as a listener.
 *
 * @param  event  A change event pointing to the source of the change
 */
@Override
public void stateChanged(IChemObjectChangeEvent event) {
  notifyChanged(event);
}

/**
 *  Called by objects to which this object has
 *  registered as a listener.
 *
 * @param  event  A change event pointing to the source of the change
 */
@Override
public void stateChanged(IChemObjectChangeEvent event) {
  notifyChanged(event);
}

/**
 * Sets the coefficient of a AtomContainer to a given value.
 *
 * @param  position    The position of the AtomContainer for which the multiplier is
 *                    set in [0,..]
 * @param  multiplier  The new multiplier for the AtomContatiner at
 *                    <code>position</code>
 * @see                #getMultiplier(int)
 */
@Override
public void setMultiplier(int position, Double multiplier) {
  multipliers[position] = multiplier;
  notifyChanged();
}

/**
 * Sets the coefficient of a AtomContainer to a given value.
 *
 * @param  position    The position of the AtomContainer for which the multiplier is
 *                    set in [0,..]
 * @param  multiplier  The new multiplier for the AtomContatiner at
 *                    <code>position</code>
 * @see                #getMultiplier(int)
 */
@Override
public void setMultiplier(int position, Double multiplier) {
  multipliers[position] = multiplier;
  notifyChanged();
}

/**
 * Sets the coefficient of a AtomContainer to a given value.
 *
 * @param  container   The AtomContainer for which the multiplier is set
 * @param  multiplier  The new multiplier for the AtomContatiner
 * @return             true if multiplier has been set
 * @see                #getMultiplier(IAtomContainer)
 */
@Override
public boolean setMultiplier(IAtomContainer container, Double multiplier) {
  for (int i = 0; i < atomContainers.length; i++) {
    if (atomContainers[i] == container) {
      multipliers[i] = multiplier;
      notifyChanged();
      return true;
    }
  }
  return false;
}

/**
 * Sets the coefficient of a AtomContainer to a given value.
 *
 * @param  container   The AtomContainer for which the multiplier is set
 * @param  multiplier  The new multiplier for the AtomContatiner
 * @return             true if multiplier has been set
 * @see                #getMultiplier(IAtomContainer)
 */
@Override
public boolean setMultiplier(IAtomContainer container, Double multiplier) {
  for (int i = 0; i < atomContainers.length; i++) {
    if (atomContainers[i] == container) {
      multipliers[i] = multiplier;
      notifyChanged();
      return true;
    }
  }
  return false;
}

/**
 * Sets the multipliers of the AtomContainers.
 *
 * @param  newMultipliers  The new multipliers for the AtomContainers in this set
 * @return                 true if multipliers have been set.
 * @see                    #getMultipliers
 */
@Override
public boolean setMultipliers(Double[] newMultipliers) {
  if (newMultipliers.length == atomContainerCount) {
    if (multipliers == null) {
      multipliers = new Double[atomContainerCount];
    }
    System.arraycopy(newMultipliers, 0, multipliers, 0, atomContainerCount);
    notifyChanged();
    return true;
  }
  return false;
}

/**
 * Sets the multipliers of the AtomContainers.
 *
 * @param  newMultipliers  The new multipliers for the AtomContainers in this set
 * @return                 true if multipliers have been set.
 * @see                    #getMultipliers
 */
@Override
public boolean setMultipliers(Double[] newMultipliers) {
  if (newMultipliers.length == atomContainerCount) {
    if (multipliers == null) {
      multipliers = new Double[atomContainerCount];
    }
    System.arraycopy(newMultipliers, 0, multipliers, 0, atomContainerCount);
    notifyChanged();
    return true;
  }
  return false;
}

/** {@inheritDoc} */
@Override
public void notifyChanged(IChemObjectChangeEvent evt) {
  logger.debug("Notifying changed event: ", evt);
  super.notifyChanged(evt);
}

/** {@inheritDoc} */
@Override
public void notifyChanged() {
  logger.debug("Notifying changed");
  super.notifyChanged();
}

/** {@inheritDoc} */
@Override
public void notifyChanged() {
  logger.debug("Notifying changed");
  super.notifyChanged();
}

/** {@inheritDoc} */
@Override
public void notifyChanged(IChemObjectChangeEvent evt) {
  logger.debug("Notifying changed event: ", evt);
  super.notifyChanged(evt);
}

/**
 * Removes all AtomContainer from this container.
 */
@Override
public void removeAllAtomContainers() {
  for (int pos = atomContainerCount - 1; pos >= 0; pos--) {
    atomContainers[pos].removeListener(this);
    multipliers[pos] = 0.0;
    atomContainers[pos] = null;
  }
  atomContainerCount = 0;
  notifyChanged();
}

/**
 * Removes all AtomContainer from this container.
 */
@Override
public void removeAllAtomContainers() {
  for (int pos = atomContainerCount - 1; pos >= 0; pos--) {
    atomContainers[pos].removeListener(this);
    multipliers[pos] = 0.0;
    atomContainers[pos] = null;
  }
  atomContainerCount = 0;
  notifyChanged();
}

/**
 * Removes an AtomContainer from this container.
 *
 * @param  pos  The position of the AtomContainer to be removed from this container
 */
@Override
public void removeAtomContainer(int pos) {
  atomContainers[pos].removeListener(this);
  for (int i = pos; i < atomContainerCount - 1; i++) {
    atomContainers[i] = atomContainers[i + 1];
    multipliers[i] = multipliers[i + 1];
  }
  atomContainers[atomContainerCount - 1] = null;
  atomContainerCount--;
  notifyChanged();
}

/**
 * Removes an AtomContainer from this container.
 *
 * @param  pos  The position of the AtomContainer to be removed from this container
 */
@Override
public void removeAtomContainer(int pos) {
  atomContainers[pos].removeListener(this);
  for (int i = pos; i < atomContainerCount - 1; i++) {
    atomContainers[i] = atomContainers[i + 1];
    multipliers[i] = multipliers[i + 1];
  }
  atomContainers[atomContainerCount - 1] = null;
  atomContainerCount--;
  notifyChanged();
}

/**
 * Replace the AtomContainer at a specific position (array has to be large enough).
 *
 * @param position   position in array for AtomContainer
 * @param container  the replacement AtomContainer
 */
@Override
public void replaceAtomContainer(int position, IAtomContainer container) {
  IAtomContainer old = atomContainers[position];
  old.removeListener(this);
  atomContainers[position] = container;
  container.addListener(this);
  notifyChanged();
}

/**
 * Replace the AtomContainer at a specific position (array has to be large enough).
 *
 * @param position   position in array for AtomContainer
 * @param container  the replacement AtomContainer
 */
@Override
public void replaceAtomContainer(int position, IAtomContainer container) {
  IAtomContainer old = atomContainers[position];
  old.removeListener(this);
  atomContainers[position] = container;
  container.addListener(this);
  notifyChanged();
}

/**
 * Adds an atomContainer to this container with the given
 * multiplier.
 *
 * @param  atomContainer  The atomContainer to be added to this container
 * @param  multiplier     The multiplier of this atomContainer
 */
@Override
public void addAtomContainer(IAtomContainer atomContainer, double multiplier) {
  if (atomContainerCount + 1 >= atomContainers.length) {
    growAtomContainerArray();
  }
  atomContainer.addListener(this);
  atomContainers[atomContainerCount] = atomContainer;
  multipliers[atomContainerCount] = multiplier;
  atomContainerCount++;
  notifyChanged();
}

/**
 * Adds an atomContainer to this container with the given
 * multiplier.
 *
 * @param  atomContainer  The atomContainer to be added to this container
 * @param  multiplier     The multiplier of this atomContainer
 */
@Override
public void addAtomContainer(IAtomContainer atomContainer, double multiplier) {
  if (atomContainerCount + 1 >= atomContainers.length) {
    growAtomContainerArray();
  }
  atomContainer.addListener(this);
  atomContainers[atomContainerCount] = atomContainer;
  multipliers[atomContainerCount] = multiplier;
  atomContainerCount++;
  notifyChanged();
}