@Test(groups = {"all", "fast", "automated"}) public void testSizeZ() { if (config == null) throw new SkipException("No config tree"); String testName = "SizeZ"; if (!initFile()) result(testName, false, "initFile"); for (int i=0; i<reader.getSeriesCount(); i++) { reader.setSeries(i); config.setSeries(i); if (reader.getSizeZ() != config.getSizeZ()) { result(testName, false, "Series " + i + " (expected " + config.getSizeZ() + ", actual " + reader.getSizeZ() + ")"); } } result(testName, true); }
formatTip = format; resText = reader.getSizeX() + " x " + reader.getSizeY(); zctText = reader.getSizeZ() + "Z x " + reader.getSizeT() + "T x " + reader.getSizeC() + "C"; typeText = reader.getRGBChannelCount() + " x " + int z = reader.getSizeZ() / 2; int t = reader.getSizeT() / 2; int ndx = reader.getIndex(z, 0, t);
formatTip = format; resText = reader.getSizeX() + " x " + reader.getSizeY(); zctText = reader.getSizeZ() + "Z x " + reader.getSizeT() + "T x " + reader.getSizeC() + "C"; typeText = reader.getRGBChannelCount() + " x " + int z = reader.getSizeZ() / 2; int t = reader.getSizeT() / 2; int ndx = reader.getIndex(z, 0, t);
@Test(groups = {"all", "fast", "automated"}) public void testImageCount() { String testName = "testImageCount"; if (!initFile()) result(testName, false, "initFile"); boolean success = true; String msg = null; try { for (int i=0; i<reader.getSeriesCount() && success; i++) { reader.setSeries(i); int imageCount = reader.getImageCount(); int z = reader.getSizeZ(); int c = reader.getEffectiveSizeC(); int t = reader.getSizeT(); success = imageCount == z * c * t; msg = "series #" + i + ": imageCount=" + imageCount + ", z=" + z + ", c=" + c + ", t=" + t; } } catch (Throwable t) { LOGGER.info("", t); success = false; } result(testName, success, msg); }
int z = thumbReader.getSizeZ() / 2; int t = thumbReader.getSizeT() / 2; int ndx = thumbReader.getIndex(z, 0, t);
int z = thumbReader.getSizeZ() / 2; int t = thumbReader.getSizeT() / 2; int ndx = thumbReader.getIndex(z, 0, t);
ProgressMonitor progress = new ProgressMonitor(this, "Reading " + id, null, 0, num + 1); sizeZ = myReader.getSizeZ(); sizeT = myReader.getSizeT(); sizeC = myReader.getEffectiveSizeC();
ProgressMonitor progress = new ProgressMonitor(this, "Reading " + id, null, 0, num + 1); sizeZ = myReader.getSizeZ(); sizeT = myReader.getSizeT(); sizeC = myReader.getEffectiveSizeC();