@Override public int getObjectCount() { return reader.getImageCount(); }
@Override public int getObjectCount() { return reader.getImageCount(); }
for (int i=0; i<seriesCount; i++) { reader.setSeries(i); int imageCount = reader.getImageCount(); totalPlanes += imageCount; int planeSize = FormatTools.getPlaneSize(reader);
@Test(groups = {"all", "fast", "automated"}) public void testImageCount() { String testName = "testImageCount"; if (!initFile()) result(testName, false, "initFile"); boolean success = true; String msg = null; try { for (int i=0; i<reader.getSeriesCount() && success; i++) { reader.setSeries(i); int imageCount = reader.getImageCount(); int z = reader.getSizeZ(); int c = reader.getEffectiveSizeC(); int t = reader.getSizeT(); success = imageCount == z * c * t; msg = "series #" + i + ": imageCount=" + imageCount + ", z=" + z + ", c=" + c + ", t=" + t; } } catch (Throwable t) { LOGGER.info("", t); success = false; } result(testName, success, msg); }
config.setSeries(i); if (reader.getImageCount() != retrieve.getPlaneCount(i)) { continue; Time exposureTime = config.getExposureTime(c); for (int p=0; p<reader.getImageCount(); p++) { int[] zct = reader.getZCTCoords(p); if (zct[1] == c && p < retrieve.getPlaneCount(i)) {
int num = reader.getImageCount(); if (num > 3) num = 3; // test first three image planes only, for speed for (int j=0; j<num && success; j++) {
for (int p=0; p<reader.getImageCount(); p++) { Time deltaT = null; try {
int num = myReader.getImageCount(); ProgressMonitor progress = new ProgressMonitor(this, "Reading " + id, null, 0, num + 1);
int num = myReader.getImageCount(); ProgressMonitor progress = new ProgressMonitor(this, "Reading " + id, null, 0, num + 1);
int num = reader.getImageCount(); if (num > 3) num = 3; // test first three planes only, for speed for (int j=0; j<num && success; j++) {
config.setSeries(i); for (int p=0; p<reader.getImageCount(); p++) { Length posX = null; Length posY = null;
reader.setSeries(series); writer.setSeries(series); int imageCount = writer.canDoStacks() ? reader.getImageCount() : 1; for (int image=0; image<imageCount; image++) { writer.saveBytes(image, reader.openBytes(image)); int expectedCount = config.getSizeZ() * config.getSizeT() * (expectRGB ? 1 : config.getSizeC()); boolean imageMatch = convertedReader.getImageCount() == expectedCount; for (int i=0; i<reader.getSeriesCount(); i++) { reader.setSeries(i); totalImages += reader.getImageCount(); if (convertedReader.getImageCount() != totalImages) { success = false; msg = "Series counts do not match (found " + int count = convertedReader.getImageCount(); boolean rgb = convertedReader.isRGB(); int pixelType = convertedReader.getPixelType();