/** * Retrieves an {@link ome.xml.model.enums.Correction} enumeration * value for the given String. * * @throws ome.xml.model.enums.EnumerationException if an appropriate * enumeration value is not found. * @deprecated Use {@link MetadataTools#getCorrection(String)}. */ @Deprecated protected Correction getCorrection(String value) throws FormatException { return MetadataTools.getCorrection(value); } /**
/** * Retrieves an {@link ome.xml.model.enums.Correction} enumeration * value for the given String. * * @throws ome.xml.model.enums.EnumerationException if an appropriate * enumeration value is not found. * @deprecated Use {@link MetadataTools#getCorrection(String)}. */ @Deprecated protected Correction getCorrection(String value) throws FormatException { return MetadataTools.getCorrection(value); } /**
store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, i);
store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, i);
store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0);
store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0);
store.setInstrumentID(MetadataTools.createLSID("Instrument", 0), 0); store.setObjectiveID(MetadataTools.createLSID("Objective", 0, 0), 0, 0); store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0); store.setObjectiveNominalMagnification(new Double(mag), 0, 0);
store.setInstrumentID(MetadataTools.createLSID("Instrument", 0), 0); store.setObjectiveID(MetadataTools.createLSID("Objective", 0, 0), 0, 0); store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0); store.setObjectiveNominalMagnification(new Double(mag), 0, 0);
store.setObjectiveCorrection(MetadataTools.getCorrection(correction), 0, i);
store.setObjectiveCorrection(MetadataTools.getCorrection(correction), 0, i);
store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0);
store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0);
store.setObjectiveCorrection(MetadataTools.getCorrection(correction), 0, 0); store.setObjectiveLensNA(lensNA, 0, 0); store.setObjectiveWorkingDistance(new Length(workingDistance, UNITS.MICROMETER), 0, 0);
store.setObjectiveCorrection(MetadataTools.getCorrection(correction), 0, 0); store.setObjectiveLensNA(lensNA, 0, 0); store.setObjectiveWorkingDistance(new Length(workingDistance, UNITS.MICROMETER), 0, 0);
@Override protected void initMetadataStore() throws FormatException { super.initMetadataStore(); MetadataStore store = makeFilterMetadata(); date = DateTools.formatDate(date, "HH:mm dd-MMM-yyyy"); if (date != null) { store.setImageAcquisitionDate(new Timestamp(date), 0); } if (getMetadataOptions().getMetadataLevel() != MetadataLevel.MINIMUM) { Length sizeX = FormatTools.getPhysicalSizeX(xSize); Length sizeY = FormatTools.getPhysicalSizeY(xSize); if (sizeX != null) { store.setPixelsPhysicalSizeX(sizeX, 0); } if (sizeY != null) { store.setPixelsPhysicalSizeY(sizeY, 0); } String instrument = MetadataTools.createLSID("Instrument", 0); store.setInstrumentID(instrument, 0); store.setImageInstrumentRef(instrument, 0); store.setObjectiveID(MetadataTools.createLSID("Objective", 0, 0), 0, 0); store.setObjectiveWorkingDistance(new Length(workingDistance, UNITS.MICROMETER), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0); store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); } }
@Override protected void initMetadataStore() throws FormatException { super.initMetadataStore(); MetadataStore store = makeFilterMetadata(); date = DateTools.formatDate(date, "HH:mm dd-MMM-yyyy"); if (date != null) { store.setImageAcquisitionDate(new Timestamp(date), 0); } if (getMetadataOptions().getMetadataLevel() != MetadataLevel.MINIMUM) { Length sizeX = FormatTools.getPhysicalSizeX(xSize); Length sizeY = FormatTools.getPhysicalSizeY(xSize); if (sizeX != null) { store.setPixelsPhysicalSizeX(sizeX, 0); } if (sizeY != null) { store.setPixelsPhysicalSizeY(sizeY, 0); } String instrument = MetadataTools.createLSID("Instrument", 0); store.setInstrumentID(instrument, 0); store.setImageInstrumentRef(instrument, 0); store.setObjectiveID(MetadataTools.createLSID("Objective", 0, 0), 0, 0); store.setObjectiveWorkingDistance(new Length(workingDistance, UNITS.MICROMETER), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0); store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); } }
store.setObjectiveID(MetadataTools.createLSID("Objective", 0, 0), 0, 0); store.setObjectiveNominalMagnification(magnification, 0, 0); store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0);
store.setObjectiveID(MetadataTools.createLSID("Objective", 0, 0), 0, 0); store.setObjectiveNominalMagnification(magnification, 0, 0); store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0);
store.setObjectiveID(objective, 0, 0); store.setObjectiveNominalMagnification(magnification, 0, 0); store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0); store.setObjectiveSettingsID(objective, 0);
store.setObjectiveID(objective, 0, 0); store.setObjectiveNominalMagnification(magnification, 0, 0); store.setObjectiveCorrection(MetadataTools.getCorrection("Other"), 0, 0); store.setObjectiveImmersion(MetadataTools.getImmersion("Other"), 0, 0); store.setObjectiveSettingsID(objective, 0);