@Override public int getCoreIndex() { return reader.getCoreIndex(); }
@Override public int getCoreIndex() { return reader.getCoreIndex(); }
@Override public int getCoreIndex() { FormatTools.assertId(getCurrentFile(), true, 2); return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex; }
@Override public int getCoreIndex() { FormatTools.assertId(getCurrentFile(), true, 2); return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex; }
@Override public int getCoreIndex() { return getReader().getCoreIndex(); }
@Override public int getCoreIndex() { return getReader().getCoreIndex(); }
config.setSeries(resolutionReader.getCoreIndex());
config.setSeries(resolutionReader.getCoreIndex());
public CoreMetadata(IFormatReader r, int coreIndex) { int currentIndex = r.getCoreIndex(); r.setCoreIndex(coreIndex); sizeX = r.getSizeX(); sizeY = r.getSizeY(); sizeZ = r.getSizeZ(); sizeC = r.getSizeC(); sizeT = r.getSizeT(); thumbSizeX = r.getThumbSizeX(); thumbSizeY = r.getThumbSizeY(); pixelType = r.getPixelType(); bitsPerPixel = r.getBitsPerPixel(); imageCount = r.getImageCount(); dimensionOrder = r.getDimensionOrder(); orderCertain = r.isOrderCertain(); rgb = r.isRGB(); littleEndian = r.isLittleEndian(); interleaved = r.isInterleaved(); indexed = r.isIndexed(); falseColor = r.isFalseColor(); metadataComplete = r.isMetadataComplete(); seriesMetadata = new Hashtable<String, Object>(); seriesMetadata.putAll(r.getSeriesMetadata()); thumbnail = r.isThumbnailSeries(); resolutionCount = r.getResolutionCount(); moduloZ = r.getModuloZ(); moduloC = r.getModuloC(); moduloT = r.getModuloT(); r.setCoreIndex(currentIndex); }
for (int resolution = 0; resolution < resolutionCount; resolution++) { unflattenedReader.setResolution(resolution); int index = unflattenedReader.getCoreIndex(); reader.setCoreIndex(index);
public CoreMetadata(IFormatReader r, int coreIndex) { int currentIndex = r.getCoreIndex(); r.setCoreIndex(coreIndex); sizeX = r.getSizeX(); sizeY = r.getSizeY(); sizeZ = r.getSizeZ(); sizeC = r.getSizeC(); sizeT = r.getSizeT(); thumbSizeX = r.getThumbSizeX(); thumbSizeY = r.getThumbSizeY(); pixelType = r.getPixelType(); bitsPerPixel = r.getBitsPerPixel(); imageCount = r.getImageCount(); dimensionOrder = r.getDimensionOrder(); orderCertain = r.isOrderCertain(); rgb = r.isRGB(); littleEndian = r.isLittleEndian(); interleaved = r.isInterleaved(); indexed = r.isIndexed(); falseColor = r.isFalseColor(); metadataComplete = r.isMetadataComplete(); seriesMetadata = r.getSeriesMetadata(); thumbnail = r.isThumbnailSeries(); resolutionCount = r.getResolutionCount(); moduloZ = r.getModuloZ(); moduloC = r.getModuloC(); moduloT = r.getModuloT(); r.setCoreIndex(currentIndex); }