/** Returns true if the operator is a Skipped Region Insertion or Deletion operator */ public boolean isIndelOrSkippedRegion() { return this == N || isIndel(); }
@Test(dataProvider = "opStatus") public void testIsSetOfOperations(final CigarOperator op, final boolean isClipping, final boolean isIndel,final boolean isSkip, final boolean isAlignment, final boolean isPadding) throws Exception { Assert.assertEquals(op.isClipping(), isClipping); Assert.assertEquals(op.isIndel(), isIndel); Assert.assertEquals(op.isIndelOrSkippedRegion(), isIndel || isSkip); Assert.assertEquals(op.isAlignment(), isAlignment); Assert.assertEquals(op.isPadding(), isPadding); } }
/** Returns true if the operator is a Skipped Region Insertion or Deletion operator */ public boolean isIndelOrSkippedRegion() { return this == N || isIndel(); }
private static boolean isInDelOperator(final CigarOperator op) { return op !=null && op.isIndel(); }
private static boolean isInDelOperator(final CigarOperator op) { return op !=null && op.isIndel(); }