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InteractionParser
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How to use
InteractionParser
in
uk.ac.ebi.intact.application.dataConversion.psiUpload.parser

Best Java code snippets using uk.ac.ebi.intact.application.dataConversion.psiUpload.parser.InteractionParser (Showing top 3 results out of 315)

origin: uk.ac.ebi.intact.util/data-conversion

  /**
   * @param entry
   */
  public Collection process( final Element entry ) {

    final Element interactionList = DOMUtil.getFirstElement( entry, "interactionList" );
    final NodeList someInteractions = interactionList.getElementsByTagName( "interaction" );
    final int count = someInteractions.getLength();

    final Collection interactions = new ArrayList( count );

    for ( int i = 0; i < count; i++ ) {
      final Element interactionNode = (Element) someInteractions.item( i );
      final InteractionParser interaction = new InteractionParser( experimentList, participantList,
                                     interactionNode );
      InteractionTag interactionTag = interaction.process();

      if ( interactionTag != null ) {
        interactions.add( interactionTag );
      }
    } // interactions

    return interactions;
  }
}
origin: uk.ac.ebi.intact.app/data-conversion

  /**
   * @param entry
   */
  public Collection process( final Element entry ) {

    final Element interactionList = DOMUtil.getFirstElement( entry, "interactionList" );
    final NodeList someInteractions = interactionList.getElementsByTagName( "interaction" );
    final int count = someInteractions.getLength();

    final Collection interactions = new ArrayList( count );

    for ( int i = 0; i < count; i++ ) {
      final Element interactionNode = (Element) someInteractions.item( i );
      final InteractionParser interaction = new InteractionParser( experimentList, participantList,
                                     interactionNode );
      InteractionTag interactionTag = interaction.process();

      if ( interactionTag != null ) {
        interactions.add( interactionTag );
      }
    } // interactions

    return interactions;
  }
}
origin: uk.ac.ebi.intact.dataexchange.psimi.legacy/data-conversion

  /**
   * @param entry
   */
  public Collection process( final Element entry ) {

    final Element interactionList = DOMUtil.getFirstElement( entry, "interactionList" );
    final NodeList someInteractions = interactionList.getElementsByTagName( "interaction" );
    final int count = someInteractions.getLength();

    final Collection interactions = new ArrayList( count );

    for ( int i = 0; i < count; i++ ) {
      final Element interactionNode = (Element) someInteractions.item( i );
      final InteractionParser interaction = new InteractionParser( experimentList, participantList,
                                     interactionNode );
      InteractionTag interactionTag = interaction.process();

      if ( interactionTag != null ) {
        interactions.add( interactionTag );
      }
    } // interactions

    return interactions;
  }
}
uk.ac.ebi.intact.application.dataConversion.psiUpload.parserInteractionParser

Javadoc

That class .

Most used methods

  • <init>
  • process

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