How to use

uk.ac.ebi.intact.application.dataConversion.psiUpload.parser.InteractionParser

constructor

  /**
   * @param entry
   */
  public Collection process( final Element entry ) {

    final Element interactionList = DOMUtil.getFirstElement( entry, "interactionList" );
    final NodeList someInteractions = interactionList.getElementsByTagName( "interaction" );
    final int count = someInteractions.getLength();

    final Collection interactions = new ArrayList( count );

    for ( int i = 0; i < count; i++ ) {
      final Element interactionNode = (Element) someInteractions.item( i );
      final InteractionParser interaction = new InteractionParser( experimentList, participantList,
                                     interactionNode );
      InteractionTag interactionTag = interaction.process();

      if ( interactionTag != null ) {
        interactions.add( interactionTag );
      }
    } // interactions

    return interactions;
  }
}

  /**
   * @param entry
   */
  public Collection process( final Element entry ) {

    final Element interactionList = DOMUtil.getFirstElement( entry, "interactionList" );
    final NodeList someInteractions = interactionList.getElementsByTagName( "interaction" );
    final int count = someInteractions.getLength();

    final Collection interactions = new ArrayList( count );

    for ( int i = 0; i < count; i++ ) {
      final Element interactionNode = (Element) someInteractions.item( i );
      final InteractionParser interaction = new InteractionParser( experimentList, participantList,
                                     interactionNode );
      InteractionTag interactionTag = interaction.process();

      if ( interactionTag != null ) {
        interactions.add( interactionTag );
      }
    } // interactions

    return interactions;
  }
}

  /**
   * @param entry
   */
  public Collection process( final Element entry ) {

    final Element interactionList = DOMUtil.getFirstElement( entry, "interactionList" );
    final NodeList someInteractions = interactionList.getElementsByTagName( "interaction" );
    final int count = someInteractions.getLength();

    final Collection interactions = new ArrayList( count );

    for ( int i = 0; i < count; i++ ) {
      final Element interactionNode = (Element) someInteractions.item( i );
      final InteractionParser interaction = new InteractionParser( experimentList, participantList,
                                     interactionNode );
      InteractionTag interactionTag = interaction.process();

      if ( interactionTag != null ) {
        interactions.add( interactionTag );
      }
    } // interactions

    return interactions;
  }
}