sampleDescriptor.setAttribute("refname", experiment.getLibrary().getSample().getAlias()); sampleDescriptor.setAttribute("refcenter", centreName); if (!isStringEmptyOrNull(experiment.getLibrary().getSample().getAccession())) { sampleDescriptor.setAttribute("accession", experiment.getLibrary().getSample().getAccession());
public static SampleDto asDto(@Nonnull Sample from, boolean includeBoxPositions) { SampleDto dto = null; if (isDetailedSample(from)) { dto = asDetailedSampleDto((DetailedSample) from); } else { dto = new SampleDto(); } copySampleFields(from, dto, includeBoxPositions); dto.setAccession(from.getAccession()); if (from.getQCs() != null && !from.getQCs().isEmpty()) { dto.setQcs(asQcDtos(from.getQCs())); } return dto; }
v.setSampleAccession(sam.getAccession()); v.setSampleAlias(sam.getAlias()); v.setSampleDescription(sam.getDescription());