protected void convertAffiliations(YElement yElement, BibEntry bibEntry) { List<YAffiliation> affiliations = yElement.getAffiliations(); if (affiliations.size() == 1) { bibEntry.setField(BibEntry.FIELD_AFFILIATION, affiliations.get(0).getSimpleText()); } else if (affiliations.size() > 1) { StringBuilder sb = new StringBuilder(); sb.append(affiliations.get(0).getSimpleText()); for (int i = 1; i < affiliations.size(); i++) { sb.append("; "); sb.append(affiliations.get(i).getSimpleText()); } bibEntry.setField(BibEntry.FIELD_AFFILIATION, sb.toString()); } } }
private Set<String> getAffiliationNamesFromRefs(YContributor contributor, AbstractElementInfo<?> abstractElementInfo) { Set<String> affNames = new HashSet<>(); List<String> affRefs = contributor.getAffiliationRefs(); for (String ref : affRefs) { YAffiliation yAffiliation = abstractElementInfo.getAffiliation(ref); if (yAffiliation != null) { String name = yAffiliation.getSimpleText(); if (StringUtils.isNotBlank(name)) { affNames.add(name); } } } return affNames; }
@Override void compare(YElement expected, YElement actual, EvalResult result) { List<YAffiliation> expAff = expected.getAffiliations(); Map<String, YAffiliation> actAffMap = new HashMap<String, YAffiliation>(); for (YAffiliation yaff : actual.getAffiliations()) { String id = yaff.getId(); actAffMap.put(id, yaff); } for (YAffiliation yaff : expAff) { String id = yaff.getId(); if (actAffMap.containsKey(id)) { if (yaff.getSimpleText().equalsIgnoreCase(actAffMap.get(id).getSimpleText())) { result.append("Affiliation", ResultStatus.RECOGNIZED, 1); } else { result.append("Affiliation", ResultStatus.FAILED, 1); } actAffMap.remove(id); } else { result.append("Affiliation", ResultStatus.FAILED, 1); } } for (String id : actAffMap.keySet()) { result.append("Affiliation", ResultStatus.REDUNDANT, 1); } } },
if (af.getSimpleText()!=null && af.getSimpleText().length() > 0) { aff.append(af.getSimpleText()); } else if (af.getRichText()!=null) { aff.append(af.getRichText());
/** * accomplished */ private void proceedAffiliations() { if(!in_item.getAffiliations().isEmpty()){ int aff = 0; for(YAffiliation ya : in_item.getAffiliations()){ paos_doc.add(new PredicateAndObject(RelConstants.RL_CONTAINS_AFFILIATION, RelConstants.NS_AFFILIATION+in_item.getId().substring(0)+"#a"+aff)); Statements s_affil = new Statements(); s_affil.setSubject(RelConstants.NS_AFFILIATION+in_item.getId().substring(0)+"#a"+aff); LinkedList<PredicateAndObject> paos_affil = new LinkedList<PredicateAndObject>(); if(!ya.getSimpleText().isEmpty() && ya.getSimpleText()!=null) paos_affil.add(new PredicateAndObject(RelConstants.RL_TEXT, ya.getSimpleText())); // if(ya.getIdentity()!=null && ya.getIdentity().length()!=0) // paos_affil.add(new PredicateAndObject(RelConstants.RL_TEXT, ya.getIdentity())); //TODO inne parametry afiliacji s_affil.setContinuations(paos_affil); statements.add(s_affil); aff++; } } }
YAffiliation yAffiliation = element.getAffiliation(affId); if (yAffiliation != null) { String affText = yAffiliation.getSimpleText(); if (StringUtils.isNotBlank(affText)) { if (affiliationList.length() > 0) {
/** * accomplished */ private void proceedAffiliations() { if(!in_item.getAffiliations().isEmpty()){ int aff = 0; for(YAffiliation ya : in_item.getAffiliations()){ paos_doc.add(new PredicateAndObject(RelConstants.RL_CONTAINS_AFFILIATION, RelConstants.NS_AFFILIATION+in_item.getId().substring(0)+"/a"+aff)); Statements s_affil = new Statements(); s_affil.setSubject(RelConstants.NS_AFFILIATION+in_item.getId().substring(0)+"/a"+aff); LinkedList<PredicateAndObject> paos_affil = new LinkedList<PredicateAndObject>(); if(ya.getSimpleText()!=null && !ya.getSimpleText().isEmpty()) paos_affil.add(new PredicateAndObject(RelConstants.RL_TEXT, ya.getSimpleText())); if(ya.getId().length()>0) paos_affil.add(new PredicateAndObject(RelConstants.RL_ID, ya.getId())); // if(ya.getIdentity()!=null && ya.getIdentity().length()!=0) // paos_affil.add(new PredicateAndObject(RelConstants.RL_TEXT, ya.getIdentity())); //TODO inne parametry afiliacji s_affil.setContinuations(paos_affil); statements.add(s_affil); aff++; } } }
public static Map<String, FilteredString> processAffiliations(YElement yElement) { Map<String, FilteredString> affiliations = new HashMap<String, FilteredString>(); for (YAffiliation affiliation : yElement.getAffiliations()) { Joiner joiner = Joiner.on(", ").skipNulls(); final String affiliationText = joiner.join(Arrays.asList(affiliation.getOneAttributeSimpleValue(CommonAttributeTypes.AT_ORG_NAME), affiliation.getOneAttributeSimpleValue(CommonAttributeTypes.AT_ORG_DIVISION), affiliation.getOneAttributeSimpleValue(CommonAttributeTypes.AT_ADDRESS_CITY), affiliation.getOneAttributeSimpleValue(CommonAttributeTypes.AT_ADDRESS_COUNTRY))); if (StringUtils.isNotBlank(affiliationText)) { affiliations.put(affiliation.getId(), new FilteredString(affiliationText)); } else { affiliations.put(affiliation.getId(), new FilteredString(affiliation.getSimpleText())); } } return affiliations; }
while (affItr.hasNext()) { YAffiliation aff = affItr.next(); if (StringUtils.isBlank(aff.getSimpleText()) || CharMatcher.JAVA_LETTER.matchesNoneOf(aff.getSimpleText())) { removedAffiliations.add(aff.getId()); affItr.remove();
protected List<ViewAffiliation> resolveAffiliations(final YContributor contributor, final YElement element, final IFilteringContext filteringContext) { final List<ViewAffiliation> result = new LinkedList<ViewAffiliation>(); for (final String ref : contributor.getAffiliationRefs()) { final YAffiliation aff = element.getAffiliation(ref); if (aff != null) { String text = aff.getSimpleText(); if (text == null || text.length() == 0) { text = aff.getOneAttributeSimpleValue(YConstants.AT_AFFILIATION_TEXT); text = text != null ? text : ""; } result.add(new ViewAffiliation(detailsFilter.filter(text, InputType.PLAIN_TEXT, filteringContext), detailsFilter.filter(aff.getIdentity(), InputType.IDENTIFIER, filteringContext))); } } return result; }
public InstitutionsList convertInstitutions(YElement article) { InstitutionsList institutionsList = factory.createInstitutionsList(); if (article.getAffiliations() != null) { for (YAffiliation affiliation:article.getAffiliations()) { InstitutionType institution = new InstitutionType(); institution.setId(affiliation.getId()); institution.setName(affiliation.getSimpleText()); institutionsList.getInstitution().add(institution); } } return institutionsList; }
private List<DocAuthor> authorsFromYElement(final YElement element) { final List<DocAuthor> authors = new ArrayList<DocAuthor>(); for (final YContributor contributor : element.getContributors()) { final YName fullName = contributor.getDefaultName(); if (fullName == null) { continue; } // TODO: check if parsed correctly DocAuthor author = authorParser.parse(fullName.getText()); if (author == null) { author = new DocAuthor(null, fullName.getText()); } final List<DocAffiliation> affs = new ArrayList<DocAffiliation>(); for (final String affiliationRef : contributor.getAffiliationRefs()) { final YAffiliation affiliation = element.getAffiliation(affiliationRef); if (affiliation == null) { continue; } final DocAffiliation aff = affiliationParser.parse(affiliation.getSimpleText()); if (aff != null) { affs.add(aff); } } if (!affs.isEmpty()) { author.setAffiliations(affs); } authors.add(author); } return authors; }
LinkedList<PredicateAndObject> paos_affil = new LinkedList<PredicateAndObject>(); if(!ya.getSimpleText().isEmpty() && ya.getSimpleText()!=null) paos_affil.add(new PredicateAndObject(RelConstants.RL_TEXT, ya.getSimpleText()));