/** {@inheritDoc} */ @Override public int getBondCount() { logger.debug("Getting bond count"); return super.getBondCount(); }
AminoAcid acid = aminoAcids[aa]; LOGGER.debug("#bonds for ", acid.getProperty(RESIDUE_NAME).toString(), " = " + acid.getBondCount()); total += acid.getBondCount(); LOGGER.debug("total #bonds: ", total);
AminoAcid acid = aminoAcids[aa]; LOGGER.debug("#bonds for ", acid.getProperty(RESIDUE_NAME).toString(), " = " + acid.getBondCount()); total += acid.getBondCount(); LOGGER.debug("total #bonds: ", total);
aminoAcid.setProperty(NO_BONDS, "" + aminoAcid.getBondCount()); if (counter < aminoAcids.length) { aminoAcids[counter] = aminoAcid;
aminoAcid.setProperty(NO_BONDS, "" + aminoAcid.getBondCount()); if (counter < aminoAcids.length) { aminoAcids[counter] = aminoAcid;