public void parse(DicomInputStream dis) throws IOException { dis.setDicomInputHandler(this); dis.readDataset(-1, -1); }
public void parse(DicomInputStream dis) throws IOException { dis.setDicomInputHandler(this); dis.readDataset(-1, -1); }
@Override public FileVisitResult visitFile(Path path, BasicFileAttributes attrs) { try (DicomInputStream dis = new DicomInputStream(path.toFile())) { Attributes dataset = dis.readDataset(-1, -1); dataset.addAll(cliAttrs); System.out.println(format.format(dataset)); } catch (IOException e) { System.err.println("Failed to parse DICOM file " + path); e.printStackTrace(); } return FileVisitResult.CONTINUE; } }
@Override public Attributes readDataset(String tsuid) throws IOException { DicomInputStream in = new DicomInputStream(this, tsuid); try { return in.readDataset(-1, -1); } finally { SafeClose.close(in); } }
private static Attributes loadDicomObject(File f) throws IOException { if (f == null) return null; DicomInputStream dis = new DicomInputStream(f); try { return dis.readDataset(-1, -1); } finally { SafeClose.close(dis); } }
@Override public Attributes readDataset(String tsuid) throws IOException { DicomInputStream in = new DicomInputStream(this, tsuid); try { return in.readDataset(-1, -1); } finally { SafeClose.close(in); } }
private static Attributes parse(File file) throws IOException { DicomInputStream in = new DicomInputStream(file); try { in.setIncludeBulkData(IncludeBulkData.NO); return in.readDataset(-1, Tag.PixelData); } finally { SafeClose.close(in); } }
private static Attributes parse(File file) throws IOException { DicomInputStream in = new DicomInputStream(file); try { in.setIncludeBulkData(IncludeBulkData.NO); return in.readDataset(-1, Tag.PixelData); } finally { SafeClose.close(in); } }
private static Attributes parse(File file) throws IOException { DicomInputStream in = new DicomInputStream(file); try { in.setIncludeBulkData(IncludeBulkData.NO); return in.readDataset(-1, Tag.PixelData); } finally { SafeClose.close(in); } }
private static Attributes parse(File file) throws IOException { DicomInputStream in = new DicomInputStream(file); try { in.setIncludeBulkData(IncludeBulkData.NO); return in.readDataset(-1, Tag.PixelData); } finally { SafeClose.close(in); } }
private Attributes readPostAttr(DicomInputStream dis) throws IOException { Attributes postAttr = dis.readDataset(-1, -1); postAttr.addAll(metadata.getAttributes()); metadata = new DicomMetaData(metadata.getFileMetaInformation(), postAttr); return postAttr; }
public void retrieve(File f) throws IOException, InterruptedException { Attributes attrs = new Attributes(); DicomInputStream dis = null; try { attrs.addSelected(new DicomInputStream(f).readDataset(-1, -1), inFilter); } finally { SafeClose.close(dis); } attrs.addAll(keys); retrieve(attrs); }
public void retrieve(File f) throws IOException, InterruptedException { Attributes attrs = new Attributes(); DicomInputStream dis = null; try { attrs.addSelected(new DicomInputStream(f).readDataset(-1, -1), inFilter); } finally { SafeClose.close(dis); } attrs.addAll(keys); retrieve(attrs); }
@SuppressWarnings("resource") public void retrieve(File f) throws IOException, InterruptedException { Attributes attrs = new Attributes(); DicomInputStream dis = null; try { attrs.addSelected(new DicomInputStream(f).readDataset(-1, -1), inFilter); } finally { SafeClose.close(dis); } attrs.addAll(keys); retrieve(attrs); }
public void retrieve(File f) throws IOException, InterruptedException { Attributes attrs = new Attributes(); DicomInputStream dis = null; try { attrs.addSelected(new DicomInputStream(f).readDataset(-1, -1), inFilter); } finally { SafeClose.close(dis); } attrs.addAll(keys); retrieve(attrs); }
public void parse(DicomInputStream dis) throws IOException { dis.setIncludeBulkData(includeBulkData); dis.setBulkDataDescriptor(bulkDataDescriptor); dis.setBulkDataDirectory(blkDirectory); dis.setBulkDataFilePrefix(blkFilePrefix); dis.setBulkDataFileSuffix(blkFileSuffix); dis.setConcatenateBulkDataFiles(catBlkFiles); dataset = dis.readDataset(-1, -1); fmi = dis.getFileMetaInformation(); bulkDataFiles = dis.getBulkDataFiles(); }
public void parse(DicomInputStream dis) throws IOException { dis.setIncludeBulkData(includeBulkData); dis.setBulkDataDescriptor(bulkDataDescriptor); dis.setBulkDataDirectory(blkDirectory); dis.setBulkDataFilePrefix(blkFilePrefix); dis.setBulkDataFileSuffix(blkFileSuffix); dis.setConcatenateBulkDataFiles(catBlkFiles); dataset = dis.readDataset(-1, -1); fmi = dis.getFileMetaInformation(); bulkDataFiles = dis.getBulkDataFiles(); }
public void parse(DicomInputStream dis) throws IOException { dis.setIncludeBulkData(includeBulkData); dis.setBulkDataDescriptor(bulkDataDescriptor); dis.setBulkDataDirectory(blkDirectory); dis.setBulkDataFilePrefix(blkFilePrefix); dis.setBulkDataFileSuffix(blkFileSuffix); dis.setConcatenateBulkDataFiles(catBlkFiles); dataset = dis.readDataset(-1, -1); fmi = dis.getFileMetaInformation(); bulkDataFiles = dis.getBulkDataFiles(); }
public void parse(DicomInputStream dis) throws IOException { dis.setIncludeBulkData(includeBulkData); dis.setBulkDataDescriptor(bulkDataDescriptor); dis.setBulkDataDirectory(blkDirectory); dis.setBulkDataFilePrefix(blkFilePrefix); dis.setBulkDataFileSuffix(blkFileSuffix); dis.setConcatenateBulkDataFiles(catBlkFiles); JsonGenerator jsonGen = createGenerator(System.out); JSONWriter jsonWriter = new JSONWriter(jsonGen); dis.setDicomInputHandler(jsonWriter); dis.readDataset(-1, -1); jsonGen.flush(); }
public void parse(DicomInputStream dis) throws IOException { dis.setIncludeBulkData(includeBulkData); dis.setBulkDataDescriptor(bulkDataDescriptor); dis.setBulkDataDirectory(blkDirectory); dis.setBulkDataFilePrefix(blkFilePrefix); dis.setBulkDataFileSuffix(blkFileSuffix); dis.setConcatenateBulkDataFiles(catBlkFiles); JsonGenerator jsonGen = createGenerator(System.out); JSONWriter jsonWriter = new JSONWriter(jsonGen); dis.setDicomInputHandler(jsonWriter); dis.readDataset(-1, -1); jsonGen.flush(); }