- getGroup
Return the parent Group of the Atom. returns null if the referenced object is
not Group
- getName
Get atom name, e.g. "CA". Beware that some PDB atom names are ambiguous (e.g.
CA, which means C-alph
- getX
Get coordinate X.
- getY
Get coordinate Y.
- getZ
Get coordinate Z.
- getElement
Get element of the atom, e.g. Element#Ca
- setCoords
Set the coordinates.
- setGroup
Set the back-reference to its parent Group.
- setName
Set atom name, e.g. "CA".
- addBond
Add a bond
- clone
Return an identical copy of this object .
- getAltLoc
Get alternate Location.