setName(String.valueOf( element.getAttribute("Name")));
setName(String.valueOf( element.getAttribute("Name")));
public void setChannelName(String name, int imageIndex, int channelIndex) { // Parents: {u'Pixels': {u'Image': {u'OME': None}}} // Name is not a reference OME o0 = root; if (o0.sizeOfImageList() == imageIndex) { o0.addImage(new Image()); } Image o1 = o0.getImage(imageIndex); if (o1.getPixels() == null) { o1.setPixels(new Pixels()); } Pixels o2 = o1.getPixels(); if (o2.sizeOfChannelList() == channelIndex) { o2.addChannel(new Channel()); } Channel o3 = o2.getChannel(channelIndex); o3.setName(name); }
public void setChannelName(String name, int imageIndex, int channelIndex) { // Parents: {u'Pixels': {u'Image': {u'OME': None}}} // Name is not a reference OME o0 = root; if (o0.sizeOfImageList() == imageIndex) { o0.addImage(new Image()); } Image o1 = o0.getImage(imageIndex); if (o1.getPixels() == null) { o1.setPixels(new Pixels()); } Pixels o2 = o1.getPixels(); if (o2.sizeOfChannelList() == channelIndex) { o2.addChannel(new Channel()); } Channel o3 = o2.getChannel(channelIndex); o3.setName(name); }
/** * Creates a channel. * * @param index The index in the file. * @return See above. */ public Channel createChannel(int index) { Channel channel = new Channel(); channel.setID("Channel:"+index); channel.setAcquisitionMode(AcquisitionMode.FLUORESCENCELIFETIME); int argb = DEFAULT_COLOR.getRGB(); int rgba = (argb << 8) | (argb >>> (32-8)); channel.setColor(new ome.xml.model.primitives.Color(rgba)); channel.setName("Name"); channel.setIlluminationType(IlluminationType.OBLIQUE); channel.setPinholeSize(new Length(0.5, UNITS.MICROMETER)); channel.setContrastMethod(ContrastMethod.BRIGHTFIELD); PositiveFloat emWave = new PositiveFloat(300.3); channel.setEmissionWavelength(new Length(emWave.getValue(), UNITS.NANOMETER)); PositiveFloat exWave = new PositiveFloat(400.3); channel.setExcitationWavelength(new Length(exWave.getValue(), UNITS.NANOMETER)); channel.setFluor("Fluor"); channel.setNDFilter(1.0); channel.setPockelCellSetting(0); return channel; }