cm.sizeC = channels.length; cm.sizeT = framesAreTime[s] ? indexCount : sizeT; cm.pixelType = tiff.getPixelType(); cm.bitsPerPixel = bpp; cm.imageCount = cm.sizeZ * cm.sizeC * cm.sizeT;
public static void checkImage(TiffReader reader, Plane originalPlane, boolean interleaved, int rgbChannels, int seriesCount, int sizeT, String compression) throws FormatException, IOException { for (int s=0; s<reader.getSeriesCount(); s++) { reader.setSeries(s); assertEquals(reader.getSizeC(), rgbChannels); int imageCount = reader.isRGB() ? seriesCount * sizeT : rgbChannels * sizeT * seriesCount; assertEquals(reader.getImageCount(), imageCount); for (int image=0; image<reader.getImageCount(); image++) { byte[] readPlane = reader.openBytes(image); boolean lossy = compression.equals(COMPRESSION_JPEG) || compression.equals(COMPRESSION_J2K_LOSSY); boolean isJ2K = compression.equals(COMPRESSION_J2K) || compression.equals(COMPRESSION_J2K_LOSSY); boolean interleavedDiffs = interleaved || (isJ2K && !interleaved); if (!(lossy || interleavedDiffs)) { Plane newPlane = new Plane(readPlane, reader.isLittleEndian(), !reader.isInterleaved(), reader.getRGBChannelCount(), FormatTools.getPixelTypeString(reader.getPixelType())); assert(originalPlane.equals(newPlane)); } } } }
cm.sizeC = channels.length; cm.sizeT = framesAreTime[s] ? indexCount : sizeT; cm.pixelType = tiff.getPixelType(); cm.bitsPerPixel = bpp; cm.imageCount = cm.sizeZ * cm.sizeC * cm.sizeT;
FormatTools.getBytesPerPixel(getPixelType()); long[] stripOffsets = firstIFD.getStripOffsets(); long[] stripByteCounts = firstIFD.getStripByteCounts();
FormatTools.getBytesPerPixel(getPixelType()); long[] stripOffsets = firstIFD.getStripOffsets(); long[] stripByteCounts = firstIFD.getStripByteCounts();
ms0.sizeY = tiffReaders[0].getSizeY(); ms0.rgb = tiffReaders[0].isRGB(); ms0.pixelType = tiffReaders[0].getPixelType(); ms0.littleEndian = tiffReaders[0].isLittleEndian(); ms0.interleaved = tiffReaders[0].isInterleaved();
ms0.sizeY = tiffReaders[0].getSizeY(); ms0.rgb = tiffReaders[0].isRGB(); ms0.pixelType = tiffReaders[0].getPixelType(); ms0.littleEndian = tiffReaders[0].isLittleEndian(); ms0.interleaved = tiffReaders[0].isInterleaved();