How to use

get

method

in

loci.formats.in.PrairieMetadata$ValueTable

 table.put(prefix, new ValueTable());
final ValueTable subTable = (ValueTable) table.get(prefix);
final String[] tokens = value.split(",");
if (tokens.length == 1) {

 table.put(prefix, new ValueTable());
final ValueTable subTable = (ValueTable) table.get(prefix);
final String[] tokens = value.split(",");
if (tokens.length == 1) {

/**
 * Parses details of the activated channels into the {@link #activeChannels}
 * data structure from the "channel" entry of the configuration.
 */
private void parseChannels() {
 final Value channels = config.get("channel");
 if (!(channels instanceof ValueTable)) return;
 final ValueTable channelsTable = (ValueTable) channels;
 for (final String key : channelsTable.keySet()) {
  final Value value = channelsTable.get(key);
  // verify that the channel is active
  if (!b(value(value))) continue; // channel not active
  // parse the channel index (converting to a 1-based index!)
  final int channelIndex = i(key) + 1;
  // add the channel index to the active channels list
  activeChannels.add(channelIndex);
 }
}

/**
 * This steps populates the original metadata table (the tables returned by
 * {@link #getGlobalMetadata()} and {@link #getSeriesMetadata()}).
 */
private void populateOriginalMetadata() {
 final boolean minimumMetadata = isMinimumMetadata();
 if (minimumMetadata) return;
 // populate global metadata
 addGlobalMeta("cycleCount", meta.getCycleCount());
 addGlobalMeta("date", meta.getDate());
 addGlobalMeta("waitTime", meta.getWaitTime());
 addGlobalMeta("sequenceCount", sequences.size());
 final ValueTable config = meta.getConfig();
 for (final String key : config.keySet()) {
  addGlobalMeta(key, config.get(key).toString());
 }
 addGlobalMeta("meta", meta);
 // populate series metadata
 final int seriesCount = getSeriesCount();
 for (int s = 0; s < seriesCount; s++) {
  setSeries(s);
  final Sequence sequence = sequence(s);
  addSeriesMeta("cycle", sequence.getCycle());
  addSeriesMeta("indexCount", sequence.getIndexCount());
  addSeriesMeta("type", sequence.getType());
 }
 setSeries(0);
}

/**
 * This steps populates the original metadata table (the tables returned by
 * {@link #getGlobalMetadata()} and {@link #getSeriesMetadata()}).
 */
private void populateOriginalMetadata() {
 final boolean minimumMetadata = isMinimumMetadata();
 if (minimumMetadata) return;
 // populate global metadata
 addGlobalMeta("cycleCount", meta.getCycleCount());
 addGlobalMeta("date", meta.getDate());
 addGlobalMeta("waitTime", meta.getWaitTime());
 addGlobalMeta("sequenceCount", sequences.size());
 final ValueTable config = meta.getConfig();
 for (final String key : config.keySet()) {
  addGlobalMeta(key, config.get(key).toString());
 }
 addGlobalMeta("meta", meta);
 // populate series metadata
 final int seriesCount = getSeriesCount();
 for (int s = 0; s < seriesCount; s++) {
  setSeries(s);
  final Sequence sequence = sequence(s);
  addSeriesMeta("cycle", sequence.getCycle());
  addSeriesMeta("indexCount", sequence.getIndexCount());
  addSeriesMeta("type", sequence.getType());
 }
 setSeries(0);
}

 @Test
 public void testParseNewXML() throws ParserConfigurationException,
  SAXException, IOException
 {
  final Document xml = XMLTools.parseDOM(NEW_XML);
  final PrairieMetadata meta = new PrairieMetadata(xml, null, null);

  final ValueTable positionCurrent = (ValueTable)
   meta.getSequence(1).getFrame(1).getValue("positionCurrent");

  final ValueTable xAxis = (ValueTable) positionCurrent.get("XAxis");
  assertEquals("-621.412879412341", xAxis.value());

  final ValueTable yAxis = (ValueTable) positionCurrent.get("YAxis");
  assertEquals("255.652372573538", yAxis.value());

  final ValueTable zAxis = (ValueTable) positionCurrent.get("ZAxis");
  assertEquals("28.15", zAxis.get(0).value());
  assertEquals("111.23", zAxis.get(1).value());
 }
}

/**
 * Parses details of the activated channels into the {@link #activeChannels}
 * data structure from the "channel" entry of the configuration.
 */
private void parseChannels() {
 final Value channels = config.get("channel");
 if (!(channels instanceof ValueTable)) return;
 final ValueTable channelsTable = (ValueTable) channels;
 for (final String key : channelsTable.keySet()) {
  final Value value = channelsTable.get(key);
  // verify that the channel is active
  if (!b(value(value))) continue; // channel not active
  // parse the channel index (converting to a 1-based index!)
  final int channelIndex = i(key) + 1;
  // add the channel index to the active channels list
  activeChannels.add(channelIndex);
 }
}

@Test
public void testParseOldXML() throws ParserConfigurationException,
 SAXException, IOException
{
 final Document xml = XMLTools.parseDOM(OLD_XML);
 final PrairieMetadata meta = new PrairieMetadata(xml, null, null);
 final Value positionCurrent =
  meta.getSequence(1).getFrame(1).getValue("positionCurrent");
 final Value xAxis = positionCurrent.get("XAxis");
 assertEquals("0.95", xAxis.value());
 final Value yAxis = positionCurrent.get("YAxis");
 assertEquals("-4.45", yAxis.value());
 final ValueTable zAxis = (ValueTable) positionCurrent.get("ZAxis");
 assertEquals("-9", zAxis.get(0).value());
 assertEquals("62.45", zAxis.get(1).value());
}

@Override
public Value get(int index) {
 return get("" + index);
}

/** Gets the {@code value} of the given configuration {@code key}. */
public Value getConfig(final String key) {
 return config.get(key);
}

@Override
public Value get(int index) {
 return get("" + index);
}

/**
 * Gets the {@code value} of the given {@code key}, at the top-level
 * {@code <PVScan>} element.
 */
public Value getValue(final String key) {
 return scanValues.get(key);
}

/**
 * Gets the {@code value} of the given {@code key}, at the top-level
 * {@code <PVScan>} element.
 */
public Value getValue(final String key) {
 return scanValues.get(key);
}

/** Gets the {@code value} of the given configuration {@code key}. */
public Value getConfig(final String key) {
 return config.get(key);
}

/**
 * Gets the {@code value} of the given {@code key}, beneath this
 * {@code Sequence}, inferring the value from the parent {@code <PVScan>}
 * section as needed.
 */
public Value getValue(final String key) {
 if (sequenceValues.containsKey(key)) return sequenceValues.get(key);
 return PrairieMetadata.this.getValue(key);
}

/**
 * Gets the {@code value} of the given {@code key}, beneath this
 * {@code Frame}, inferring the value from the parent {@code <Sequence>}
 * or grandparent {@code <PVScan>} section as needed.
 */
public Value getValue(final String key) {
 if (frameValues.containsKey(key)) return frameValues.get(key);
 return getSequence().getValue(key);
}

/**
 * Gets the {@code value} of the given {@code key}, beneath this
 * {@code Sequence}, inferring the value from the parent {@code <PVScan>}
 * section as needed.
 */
public Value getValue(final String key) {
 if (sequenceValues.containsKey(key)) return sequenceValues.get(key);
 return PrairieMetadata.this.getValue(key);
}

/**
 * Gets the {@code value} of the given {@code key}, beneath this
 * {@code Frame}, inferring the value from the parent {@code <Sequence>}
 * or grandparent {@code <PVScan>} section as needed.
 */
public Value getValue(final String key) {
 if (frameValues.containsKey(key)) return frameValues.get(key);
 return getSequence().getValue(key);
}