ca.uhn.hl7v2.app.MessageTypeRouter.processMessage java code examples

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/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test(expected = ApplicationException.class)
public void processMessage_shouldFailOnEmptyConceptAnswers() throws Exception {
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080630094800||ORU^R01|kgWdFt0SVwwClOfJm3pe|P|2.5|1||||||||15^AMRS.ELD.FORMID\r"
      + "PID|||3^^^^~d3811480^^^^||John3^Doe^||\r"
      + "PV1||O|1^Unknown||||1^Super User (admin)|||||||||||||||||||||||||||||||||||||20080208|||||||V\r"
      + "ORC|RE||||||||20080208000000|1^Super User\r"
      + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
      + "OBX|1|CWE|5497^CD4, BY FACS^99DCT||^^99DCT|||||||||20080208";
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
}

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test(expected = ApplicationException.class)
public void processMessage_shouldFailIfTheProviderNameTypeCodeIsNotSpecifiedAndIsNotAPersonId() throws Exception {
  int patientId = 2;
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
      + "PID|||"
      + patientId
      + "^^^^||Hornblower^Horatio^Test||\r"
      + "PV1||O|1^Unknown Location||||Test^Super User (1-8)^^^^^^^&"
      + HL7Constants.PROVIDER_ASSIGNING_AUTH_IDENTIFIER
      + "&^|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
      + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT";
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
}

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test(expected = ApplicationException.class)
public void processMessage_shouldFailOnEmptyConceptProposals() throws Exception {
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080630094800||ORU^R01|kgWdFt0SVwwClOfJm3pe|P|2.5|1||||||||15^AMRS.ELD.FORMID\r"
      + "PID|||3^^^^~d3811480^^^^||John3^Doe^||\r"
      + "PV1||O|1^Unknown||||1^Super User (admin)|||||||||||||||||||||||||||||||||||||20080208|||||||V\r"
      + "ORC|RE||||||||20080208000000|1^Super User\r"
      + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
      + "OBR|1|||1284^PROBLEM LIST^99DCT\r"
      + "OBX|1|CWE|6042^PROBLEM ADDED^99DCT||PROPOSED^^99DCT|||||||||20080208";
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
}

/**
 * @see org.openmrs.hl7.HL7Service#processHL7Message(ca.uhn.hl7v2.model.Message)
 */
@Override
public Message processHL7Message(Message message) throws HL7Exception {
  // Any post-parsing (pre-routing) processing would go here
  // or a module can use AOP to do the post-parsing
  
  Message response;
  try {
    if (!router.canProcess(message)) {
      throw new HL7Exception("No route for hl7 message: " + message.getName()
          + ". Make sure you have a module installed that registers a hl7handler for this type");
    }
    response = router.processMessage(message);
  }
  catch (ApplicationException e) {
    throw new HL7Exception("Error while processing HL7 message: " + message.getName(), e);
  }
  
  return response;
}

/**
 * Should create a concept proposal because of the key string in the message
 * 
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldCreateConceptProposalAndWithObsAlongside() throws Exception {
  
  // remember initial occurrence of proposal's text in the model
  int initialOccurrences = Context.getConceptService().getConceptProposals("ASDFASDFASDF").size();
  
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20081006115934||ORU^R01|a1NZBpKqu54QyrWBEUKf|P|2.5|1||||||||3^AMRS.ELD.FORMID\r"
      + "PID|||7^^^^~asdf^^^^||Joe^ ^Smith||\r"
      + "PV1||O|1^Bishop Muge||||1^asdf asdf (5-9)|||||||||||||||||||||||||||||||||||||20081003|||||||V\r"
      + "ORC|RE||||||||20081006115645|1^Super User\r"
      + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
      + "OBX|2|DT|5096^RETURN VISIT DATE^99DCT||20081004|||||||||20081003\r"
      + "OBR|3|||1284^PROBLEM LIST^99DCT\r"
      + "OBX|2|CWE|6042^PROBLEM ADDED^99DCT||PROPOSED^ASDFASDFASDF^99DCT|||||||||20081003";
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
  
  //make sure that the proposal was added
  Assert.assertEquals("Processing of the HL7 message did not result in the new proposal being added to the model",
    initialOccurrences + 1, Context.getConceptService().getConceptProposals("ASDFASDFASDF").size());
  
}

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldCreateAnEncounterAndFindTheProviderByPersonId() throws Exception {
  int patientId = 2;
  Patient patient = new Patient(patientId);
  List<Encounter> encForPatient1 = Context.getEncounterService().getEncountersByPatient(patient);
  
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
      + "PID|||"
      + patientId
      + "^^^^||Hornblower^Horatio^Test||\r"
      + "PV1||O|1^Unknown Location||||1^name|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
      + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT";
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
  
  List<Encounter> encForPatient2 = Context.getEncounterService().getEncountersByPatient(patient);
  assertTrue("An encounter should have been created", (encForPatient1.size() + 1) == encForPatient2.size());
  
  encForPatient2.removeAll(encForPatient1);
  Assert.assertTrue(encForPatient2.size() == 1);
  
  Provider newProvider = encForPatient2.get(0).getProvidersByRole(
    Context.getEncounterService().getEncounterRoleByUuid(EncounterRole.UNKNOWN_ENCOUNTER_ROLE_UUID)).iterator()
      .next();
  Assert.assertEquals("c2299800-cca9-11e0-9572-0800200c9a66", newProvider.getUuid());
}

/**
 * Should create a concept proposal because of the key string in the message
 * 
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldCreateBasicConceptProposal() throws Exception {
  
  // remember initial occurrence of proposal's text in the model
  int initialOccurrences = Context.getConceptService().getConceptProposals("PELVIC MASS").size();
  
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080924022306||ORU^R01|Z185fTD0YozQ5kvQZD7i|P|2.5|1||||||||3^AMRS.ELD.FORMID\r"
      + "PID|||7^^^^||Joe^S^Mith||\r"
      + "PV1||O|1^Unknown Module 2||||1^Joe (1-1)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
      + "ORC|RE||||||||20080219085345|1^Joe\r"
      + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
      + "OBX|18|DT|5096^RETURN VISIT DATE^99DCT||20080506|||||||||20080212\r"
      + "OBR|19|||1284^PROBLEM LIST^99DCT\r"
      + "OBX|1|CWE|6042^PROBLEM ADDED^99DCT||PROPOSED^PELVIC MASS^99DCT|||||||||20080212";
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
  
  //make sure that the proposal was added
  Assert.assertEquals("Processing of the HL7 message did not result in the new proposal being added to the model",
    initialOccurrences + 1, Context.getConceptService().getConceptProposals("PELVIC MASS").size());
  
}

router.processMessage(hl7message);

router.processMessage(hl7message);

router.processMessage(hl7message);

    + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT";
Message hl7message = parser.parse(hl7string);
router.processMessage(hl7message);

    + "OBX|1|CWE|6042^PROBLEM ADDED^99DCT||PROPOSED^SEVERO DOLOR DE CABEZA^99DCT|||||||||20080208";
Message hl7message = parser.parse(hl7String);
router.processMessage(hl7message);

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test(expected = ApplicationException.class)
public void processMessage_shouldFailIfQuestionDatatypeIsNeitherBooleanNorNumericNorCoded() throws Exception {
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
      + "PID|||7^^^^||Collet^Test^Chebaskwony||\r"
      + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
      + "ORC|RE||||||||20080226102537|1^Super User\r"
      + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
      + "OBX|2|NM|19^FAVORITE FOOD, NON-CODED^99DCT||1|||||||||20080206";
  Assert.assertEquals("Text", Context.getConceptService().getConcept(19).getDatatype().getName());
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
}

    + "OBX|1|CWE|21^FOOD ASSISTANCE FOR ENTIRE FAMILY^99DCT||22^UNKNOWN^99DCT^2471^UNKNOWN^99NAM|||||||||20090714";
Message hl7message = parser.parse(hl7String);
router.processMessage(hl7message);

/**
 * @see ORUR01Handler#parseObs(Encounter,OBX,OBR,String)
 */
@Test
public void parseObs_shouldAddCommentsToAnObservationGroup() throws Exception {
  ObsService os = Context.getObsService();
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
      + "PID|||7^^^^||Collet^Test^Chebaskwony||\r"
      + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
      + "ORC|RE||||||||20080226102537|1^Super User\r"
      + "OBR|1|||23^FOOD CONSTRUCT^99DCT\r"
      + "NTE|1|L|This is a comment\r"
      + "OBX|1|NM|5497^CD4, BY FACS^99DCT||1|||||||||20080206\r"
      + "NTE|1|L|This should not be considered :-)";
  List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(23));
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
  List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(23));
  Obs newObservation = null;
  for (Obs newObs : newList) {
    if (!oldList.contains(newObs) && newObs.isObsGrouping()) {
      newObservation = newObs;
    }
  }
  Assert.assertEquals("This is a comment", newObservation.getComment());
}

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldSetValue_NumericForObsIfQuestionDatatypeIsNumericAndTheAnswerIsEither0Or1()
    throws Exception {
  ObsService os = Context.getObsService();
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
      + "PID|||7^^^^||Collet^Test^Chebaskwony||\r"
      + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
      + "ORC|RE||||||||20080226102537|1^Super User\r"
      + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
      + "OBX|1|NM|5497^CD4, BY FACS^99DCT||1|||||||||20080206";
  // the expected question for the obs in the hl7 message has to be
  // numeric
  Assert.assertEquals("Numeric", Context.getConceptService().getConcept(5497).getDatatype().getName());
  List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
  List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
  Obs newObservation = null;
  for (Obs newObs : newList) {
    if (!oldList.contains(newObs) && !newObs.isObsGrouping()) {
      newObservation = newObs;
    }
  }
  Assert.assertEquals(1, newObservation.getValueNumeric().intValue());
}

/**
 * @see ORUR01Handler#processMessage(Message)
 * 
 */
@Test
public void processMessage_shouldSetComplexDataForObsWithComplexConcepts() throws Exception {
  ObsHandler handler = new ObsHandler();
  final String handlerName = "NeigborHandler";
  final String data = "{\"firstname\":\"Horatio\"}";
  Context.getObsService().registerHandler(handlerName, handler);
  try {
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
        + "PID|||3^^^^||John3^Doe^||\r"
        + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
        + "ORC|RE||||||||20080226102537|1^Super User\r"
        + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
        + "OBX|1|ED|6043^uiNEIHBOR^99DCT||^^^^" + data + "|||||||||20080206\r";
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
  }
  finally {
    Context.getObsService().removeHandler(handlerName);
  }
  Assert.assertEquals(data, handler.getCreatedObs().getComplexData().getData());
}

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test(expected = ApplicationException.class)
public void processMessage_shouldFailIfQuestionDatatypeIsCodedAndABooleanIsNotAValidAnswer() throws Exception {
  GlobalProperty trueConceptGlobalProperty = new GlobalProperty(OpenmrsConstants.GLOBAL_PROPERTY_TRUE_CONCEPT, "7",
      "Concept id of the concept defining the TRUE boolean concept");
  GlobalProperty falseConceptGlobalProperty = new GlobalProperty(OpenmrsConstants.GLOBAL_PROPERTY_FALSE_CONCEPT, "8",
      "Concept id of the concept defining the TRUE boolean concept");
  Context.getAdministrationService().saveGlobalProperty(trueConceptGlobalProperty);
  Context.getAdministrationService().saveGlobalProperty(falseConceptGlobalProperty);
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
      + "PID|||7^^^^||Collet^Test^Chebaskwony||\r"
      + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
      + "ORC|RE||||||||20080226102537|1^Super User\r"
      + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
      + "OBX|2|NM|4^CIVIL STATUS^99DCT||1|||||||||20080206";
  Assert.assertEquals("Coded", Context.getConceptService().getConcept(4).getDatatype().getName());
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
}

/**
 * @see ORUR01Handler#parseObs(Encounter,OBX,OBR,String)
 */
@Test
public void parseObs_shouldAddCommentsToAnObservationFromNTESegments() throws Exception {
  ObsService os = Context.getObsService();
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
      + "PID|||7^^^^||Collet^Test^Chebaskwony||\r"
      + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
      + "ORC|RE||||||||20080226102537|1^Super User\r"
      + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
      + "OBX|1|NM|5497^CD4, BY FACS^99DCT||1|||||||||20080206\r" + "NTE|1|L|This is a comment";
  // the expected question for the obs in the hl7 message has to be
  // numeric
  Assert.assertEquals("Numeric", Context.getConceptService().getConcept(5497).getDatatype().getName());
  List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
  List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
  Obs newObservation = null;
  for (Obs newObs : newList) {
    if (!oldList.contains(newObs) && !newObs.isObsGrouping()) {
      newObservation = newObs;
    }
  }
  Assert.assertEquals("This is a comment", newObservation.getComment());
}

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldSetValue_CodedMatchingABooleanConceptForObsIfTheAnswerIs0Or1AndQuestionDatatypeIsCoded()
    throws Exception {
  ObsService os = Context.getObsService();
  String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
      + "PID|||7^^^^||Collet^Test^Chebaskwony||\r"
      + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
      + "ORC|RE||||||||20080226102537|1^Super User\r"
      + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
      + "OBX|2|NM|21^CIVIL STATUS^99DCT||1|||||||||20080206";
  // the expected question for the obs in the hl7 message has to be coded
  Assert.assertEquals("Coded", Context.getConceptService().getConcept(21).getDatatype().getName());
  List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(21));
  Message hl7message = parser.parse(hl7string);
  router.processMessage(hl7message);
  // hacky way to get the newly added obs and make tests on it
  List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(21));
  Obs newObservation = null;
  for (Obs newObs : newList) {
    if (!oldList.contains(newObs) && !newObs.isObsGrouping()) {
      newObservation = newObs;
    }
  }
  Assert.assertEquals(Context.getConceptService().getTrueConcept(), newObservation.getValueCoded());
}

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