LazyVCFGenotypesContext.HeaderDataCache headerDataCache = new LazyVCFGenotypesContext.HeaderDataCache(); headerDataCache.setHeader(readHeader()); ((LazyVCFGenotypesContext) gc).getParser().setHeaderDataCache(headerDataCache);
/** Used for lazy decoding of genotype data. Of course, each input record * may have a different header, but we currently only support one header * here... This is in part due to the fact that it's not clear what the best * solution is. */ public void setInputHeader(VCFHeader header) { vcfHeaderDataCache.setHeader(header); bcfHeaderDataCache.setHeader(header); }
/** Used for lazy decoding of genotype data. Of course, each input record * may have a different header, but we currently only support one header * here... This is in part due to the fact that it's not clear what the best * solution is. */ public void setInputHeader(VCFHeader header) { vcfHeaderDataCache.setHeader(header); bcfHeaderDataCache.setHeader(header); }
@Override public void setHeaderDataCache( LazyParsingGenotypesContext.HeaderDataCache data) { codec = (HeaderSettableVCFCodec)((HeaderDataCache)data).getCodec(); }
/** Used for lazy decoding of genotype data. Of course, each input record * may have a different header, but we currently only support one header * here... This is in part due to the fact that it's not clear what the best * solution is. */ public void setInputHeader(VCFHeader header) { vcfHeaderDataCache.setHeader(header); bcfHeaderDataCache.setHeader(header); }
@Override public void setHeaderDataCache( LazyParsingGenotypesContext.HeaderDataCache data) { codec = (HeaderSettableVCFCodec)((HeaderDataCache)data).getCodec(); }
/** Used for lazy decoding of genotype data. Of course, each input record * may have a different header, but we currently only support one header * here... This is in part due to the fact that it's not clear what the best * solution is. */ public void setInputHeader(VCFHeader header) { vcfHeaderDataCache.setHeader(header); bcfHeaderDataCache.setHeader(header); }
/** Used for lazy decoding of genotype data. Of course, each input record * may have a different header, but we currently only support one header * here... This is in part due to the fact that it's not clear what the best * solution is. */ public void setInputHeader(VCFHeader header) { vcfHeaderDataCache.setHeader(header); bcfHeaderDataCache.setHeader(header); }
@Override public void setHeaderDataCache( LazyParsingGenotypesContext.HeaderDataCache data) { codec = (HeaderSettableVCFCodec)((HeaderDataCache)data).getCodec(); }
/** Used for lazy decoding of genotype data. Of course, each input record * may have a different header, but we currently only support one header * here... This is in part due to the fact that it's not clear what the best * solution is. */ public void setInputHeader(VCFHeader header) { vcfHeaderDataCache.setHeader(header); bcfHeaderDataCache.setHeader(header); }