@Override public void handle(String currentId, String value, String qualifierBlock, String comment) { // Just register the namespace with the consumer and add it as an annotation to the ontology getConsumer().setDefaultNamespaceTagValue(value); // Add an annotation to the ontology OWLAnnotation annotation = getAnnotationForTagValuePair(OBOVocabulary.DEFAULT_NAMESPACE.getName(), value); applyChange(new AddOntologyAnnotation(getOntology(), annotation)); } }
public void handle(String id, String value) { // Set the base to be the default base + default prefix String uri = OBOVocabulary.ONTOLOGY_URI_BASE + "/" + value.toLowerCase(); getConsumer().setDefaultNamespace(uri + "#"); applyChange(new SetOntologyID(getOntology(), new OWLOntologyID(IRI.create(uri)))); } }
private void setupTagHandlers() { handlerMap = new HashMap<String, TagValueHandler>(); addTagHandler(new IDTagValueHandler(this)); addTagHandler(new NameTagValueHandler(this)); addTagHandler(new IsATagValueHandler(this)); addTagHandler(new PartOfTagValueHandler(this)); addTagHandler(new TransitiveTagValueHandler(this)); addTagHandler(new SymmetricTagValueHandler(this)); addTagHandler(new RelationshipTagValueHandler(this)); addTagHandler(new UnionOfHandler(this)); addTagHandler(new IntersectionOfHandler(this)); addTagHandler(new DisjointFromHandler(this)); addTagHandler(new AsymmetricHandler(this)); addTagHandler(new InverseHandler(this)); addTagHandler(new ReflexiveHandler(this)); addTagHandler(new TransitiveOverHandler(this)); addTagHandler(new DefaultNamespaceTagValueHandler(this)); }
private void setupTagHandlers() { handlerMap = new HashMap<String, TagValueHandler>(); addTagHandler(new OntologyTagValueHandler(this)); addTagHandler(new IDTagValueHandler(this)); addTagHandler(new NameTagValueHandler(this)); addTagHandler(new IsATagValueHandler(this)); addTagHandler(new PartOfTagValueHandler(this)); addTagHandler(new TransitiveTagValueHandler(this)); addTagHandler(new SymmetricTagValueHandler(this)); addTagHandler(new RelationshipTagValueHandler(this)); addTagHandler(new UnionOfHandler(this)); addTagHandler(new IntersectionOfHandler(this)); addTagHandler(new DisjointFromHandler(this)); addTagHandler(new AsymmetricHandler(this)); addTagHandler(new InverseHandler(this)); addTagHandler(new ReflexiveHandler(this)); addTagHandler(new TransitiveOverHandler(this)); addTagHandler(new DefaultNamespaceTagValueHandler(this)); addTagHandler(new SynonymTagValueHandler(this)); addTagHandler(new XRefTagHandler(this)); addTagHandler(new DefTagValueHandler(this)); addTagHandler(new IsObsoleteTagValueHandler(this)); addTagHandler(new IDSpaceTagValueHandler(this)); addTagHandler(new DataVersionTagValueHandler(this)); addTagHandler(new SynonymTypeDefTagHandler(this)); addTagHandler(new AltIdTagValueHandler(this)); }
public void handle(String currentId, String value, String qualifierBlock, String comment) { // Just register the namespace with the consumer and add it as an annotation to the ontology getConsumer().setDefaultNamespaceTagValue(value); // Add an annotation to the ontology OWLAnnotation annotation = getAnnotationForTagValuePair(OBOVocabulary.DEFAULT_NAMESPACE.getName(), value); applyChange(new AddOntologyAnnotation(getOntology(), annotation)); } }
private void setupTagHandlers() { handlerMap = new HashMap<String, TagValueHandler>(); addTagHandler(new OntologyTagValueHandler(this)); addTagHandler(new IDTagValueHandler(this)); addTagHandler(new NameTagValueHandler(this)); addTagHandler(new IsATagValueHandler(this)); addTagHandler(new PartOfTagValueHandler(this)); addTagHandler(new TransitiveTagValueHandler(this)); addTagHandler(new SymmetricTagValueHandler(this)); addTagHandler(new RelationshipTagValueHandler(this)); addTagHandler(new UnionOfHandler(this)); addTagHandler(new IntersectionOfHandler(this)); addTagHandler(new DisjointFromHandler(this)); addTagHandler(new AsymmetricHandler(this)); addTagHandler(new InverseHandler(this)); addTagHandler(new ReflexiveHandler(this)); addTagHandler(new TransitiveOverHandler(this)); addTagHandler(new DefaultNamespaceTagValueHandler(this)); addTagHandler(new SynonymTagValueHandler(this)); addTagHandler(new XRefTagHandler(this)); addTagHandler(new DefTagValueHandler(this)); addTagHandler(new IsObsoleteTagValueHandler(this)); addTagHandler(new IDSpaceTagValueHandler(this)); addTagHandler(new DataVersionTagValueHandler(this)); addTagHandler(new SynonymTypeDefTagHandler(this)); addTagHandler(new AltIdTagValueHandler(this)); }