ca.uhn.hl7v2.model.v25.group java code examples

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private void myMethod () {
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}

private PV1 getPV1(ORU_R01 oru) {
  return oru.getPATIENT_RESULT().getPATIENT().getVISIT().getPV1();
}

private ORC getORC(ORU_R01 oru) {
  return oru.getPATIENT_RESULT().getORDER_OBSERVATION().getORC();
}

private PID getPID(ORU_R01 oru) {
  return oru.getPATIENT_RESULT().getPATIENT().getPID();
}

int numObr = patientResult.getORDER_OBSERVATIONReps();
for (int i = 0; i < numObr; i++) {
  if (log.isDebugEnabled()) {
    log.debug("Processing OBR (" + i + " of " + numObr + ")");
  ORU_R01_ORDER_OBSERVATION orderObs = patientResult.getORDER_OBSERVATION(i);
  OBR obr = orderObs.getOBR();
    int totalNTEs = parent.getNTEReps();
    for (int iNTE = 0; iNTE < totalNTEs; iNTE++) {
      for (FT obxComment : parent.getNTE(iNTE).getComment()) {
        if (comments.length() > 0) {
          comments.append(" ");
  int numObs = orderObs.getOBSERVATIONReps();
  HL7Exception errorInHL7Queue = null;
  for (int j = 0; j < numObs; j++) {
    OBX obx = orderObs.getOBSERVATION(j).getOBX();
    try {
      log.debug("Parsing observation");

/**
 * finds NK1 segments in an ORU_R01 message. all HAPI-rendered Messages have at least one NK1
 * segment but if the original message truly does not contain an NK1, the setID will be null on
 * the generated NK1
 *
 * @param oru ORU_R01 message to be parsed for NK1 segments
 * @return list of not-null NK1 segments
 * @throws HL7Exception
 */
public List<NK1> getNK1List(ORU_R01 oru) throws HL7Exception {
  List<NK1> res = new ArrayList<>();
  // there will always be at least one NK1, even if the original message does not contain one
  for (int i = 0; i < oru.getPATIENT_RESULT().getPATIENT().getNK1Reps(); i++) {
    // if the setIDNK1 value is null, this NK1 is blank
    if (oru.getPATIENT_RESULT().getPATIENT().getNK1(i).getSetIDNK1().getValue() != null) {
      res.add(oru.getPATIENT_RESULT().getPATIENT().getNK1(i));
    }
  }
  return res;
}

/**
 * Returns a specific repetition of
 * ROL (Role) - creates it if necessary
 *
 * @param rep The repetition index (0-indexed, i.e. the first repetition is at index 0)
 * @throws HL7Exception if the repetition requested is more than one 
 *     greater than the number of existing repetitions.
 */
public ROL getROL(int rep) { 
  ROL retVal = getTyped("ROL", rep, ROL.class);
  return retVal;
}

/** 
 * Returns the number of existing repetitions of ROL 
 */ 
public int getROLReps() {  
  return getReps("ROL");
}

/** 
 * Returns the number of existing repetitions of ROL 
 */ 
public int getROLReps() {  
  return getReps("ROL");
}

/** 
 * <p>
 * Returns a non-modifiable List containing all current existing repetitions of DB1.
 * <p>
 * <p>
 * Note that unlike {@link #getDB1()}, this method will not create any reps
 * if none are already present, so an empty list may be returned.
 * </p>
 */ 
public java.util.List<DB1> getDB1All() throws HL7Exception {
  return getAllAsList("DB1", DB1.class);
}

/**
 * Returns a specific repetition of
 * ROL (Role) - creates it if necessary
 *
 * @param rep The repetition index (0-indexed, i.e. the first repetition is at index 0)
 * @throws HL7Exception if the repetition requested is more than one 
 *     greater than the number of existing repetitions.
 */
public ROL getROL(int rep) { 
  ROL retVal = getTyped("ROL", rep, ROL.class);
  return retVal;
}

/** 
 * Returns the number of existing repetitions of ROL 
 */ 
public int getROLReps() {  
  return getReps("ROL");
}

/**
 * @throws HL7Exception
 * @see HL7Service#resolveLocationId(ca.uhn.hl7v2.model.v25.datatype.PL)
 */
@Test
public void resolveLocationId_shouldReturnInternalIdentifierOfLocationIfOnlyLocationIdIsSpecified() throws HL7Exception {
  executeDataSet("org/openmrs/hl7/include/ORUTest-initialData.xml");
  HL7Service hl7service = Context.getHL7Service();
  Message message = hl7service
      .parseHL7String("MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
          + "PID|||3^^^^||John3^Doe^||\r"
          + "NK1|1|Hornblower^Horatio^L|2B^Sibling^99REL||||||||||||M|19410501|||||||||||||||||1000^^^L^PN||||\r"
          + "PV1||O|1^0^0^0&Test Location&0||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
          + "ORC|RE||||||||20080226102537|1^Super User\r"
          + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
          + "OBX|1|NM|5497^CD4, BY FACS^99DCT||450|||||||||20080206\r"
          + "OBX|2|DT|5096^RETURN VISIT DATE^99DCT||20080229|||||||||20080212");
  ORU_R01 oru = (ORU_R01) message;
  PV1 pv1 = oru.getPATIENT_RESULT().getPATIENT().getVISIT().getPV1();
  Assert.assertNotNull("PV1 parsed as null", pv1);
  PL hl7Location = pv1.getAssignedPatientLocation();
  Integer locationId = hl7service.resolveLocationId(hl7Location);
  Assert.assertEquals("Resolved and given locationId shoud be equals", Integer.valueOf(1), locationId);
}

/**
 * @throws HL7Exception
 * @see HL7Service#resolveUserId(ca.uhn.hl7v2.model.v25.datatype.XCN)
 */
@Test
public void resolveUserId_shouldReturnUserUsingFirstAndLastNameGivenUserIDIsNull() throws HL7Exception {
  HL7Service hl7service = Context.getHL7Service();
  //construct a message such that id Number at ORC is null
  Message message = hl7service
               .parseHL7String("MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" +
                       "PID|||3^^^^||John3^Doe^||\r" +
                       "NK1|1|Hornblower^Horatio^L|2B^Sibling^99REL||||||||||||M|19410501|||||||||||||||||1000^^^L^PN||||\r" +
                       "ORC|RE||||||||20080226102537|^Otterbourg^Bruno\r" +
                       "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" +
                       "OBX|1|NM|5497^CD4, BY FACS^99DCT||450|||||||||20080206\r" +
                       "OBX|2|DT|5096^RETURN VISIT DATE^99DCT||20080229|||||||||20080212");
  ORU_R01 oru = (ORU_R01) message;
  ORC orc = oru.getPATIENT_RESULT().getORDER_OBSERVATION().getORC();
  XCN xcn = orc.getEnteredBy(0);
  Integer userId = hl7service.resolveUserId(xcn);
  assertThat(userId, is(501));
}

/**
 * Returns
 * the first repetition of 
 * PROCEDURE (a Group object) - creates it if necessary
 */
public BAR_P01_PROCEDURE getPROCEDURE() { 
  BAR_P01_PROCEDURE retVal = getTyped("PROCEDURE", BAR_P01_PROCEDURE.class);
  return retVal;
}

/**
 * @throws HL7Exception
 * @see HL7Service#resolveLocationId(ca.uhn.hl7v2.model.v25.datatype.PL)
 */
@Test
public void resolveLocationId_shouldReturnInternalIdentifierOfLocationIfOnlyLocationNameIsSpecified()
    throws HL7Exception {
  executeDataSet("org/openmrs/hl7/include/ORUTest-initialData.xml");
  HL7Service hl7service = Context.getHL7Service();
  Message message = hl7service
      .parseHL7String("MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
          + "PID|||3^^^^||John3^Doe^||\r"
          + "NK1|1|Hornblower^Horatio^L|2B^Sibling^99REL||||||||||||M|19410501|||||||||||||||||1000^^^L^PN||||\r"
          + "PV1||O|99999^0^0^0&Test Location&0||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
          + "ORC|RE||||||||20080226102537|1^Super User\r"
          + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
          + "OBX|1|NM|5497^CD4, BY FACS^99DCT||450|||||||||20080206\r"
          + "OBX|2|DT|5096^RETURN VISIT DATE^99DCT||20080229|||||||||20080212");
  ORU_R01 oru = (ORU_R01) message;
  PV1 pv1 = oru.getPATIENT_RESULT().getPATIENT().getVISIT().getPV1();
  Assert.assertNotNull("PV1 parsed as null", pv1);
  PL hl7Location = pv1.getAssignedPatientLocation();
  Integer locationId = hl7service.resolveLocationId(hl7Location);
  Assert.assertEquals("Resolved and given locationId shoud be equals", Integer.valueOf(1), locationId);
}

  /**
   * @throws HL7Exception
   * @see HL7Service#resolveUserId(ca.uhn.hl7v2.model.v25.datatype.XCN)
   */
  @Test
  public void resolveUserId_shouldReturnUserUsingUsername() throws HL7Exception {
    HL7Service hl7service = Context.getHL7Service();
    //construct a message such that id Number at ORC is null
    Message message = hl7service
        .parseHL7String("MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" +
            "PID|||3^^^^||John3^Doe^||\r" +
            "NK1|1|Hornblower^Horatio^L|2B^Sibling^99REL||||||||||||M|19410501|||||||||||||||||1000^^^L^PN||||\r" +
            "ORC|RE||||||||20080226102537|^butch\r" +
            "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" +
            "OBX|1|NM|5497^CD4, BY FACS^99DCT||450|||||||||20080206\r" +
            "OBX|2|DT|5096^RETURN VISIT DATE^99DCT||20080229|||||||||20080212");
    ORU_R01 oru = (ORU_R01) message;
    ORC orc = oru.getPATIENT_RESULT().getORDER_OBSERVATION().getORC();
    XCN xcn = orc.getEnteredBy(0);
    Integer userId = hl7service.resolveUserId(xcn);
    assertThat(userId, is(502));
  }
}

/**
 * Returns a specific repetition of
 * GT1 (Guarantor) - creates it if necessary
 *
 * @param rep The repetition index (0-indexed, i.e. the first repetition is at index 0)
 * @throws HL7Exception if the repetition requested is more than one 
 *     greater than the number of existing repetitions.
 */
public GT1 getGT1(int rep) { 
  GT1 retVal = getTyped("GT1", rep, GT1.class);
  return retVal;
}

/**
 * @throws HL7Exception
 * @see HL7Service#resolveLocationId(ca.uhn.hl7v2.model.v25.datatype.PL)
 */
@Test
public void resolveLocationId_shouldReturnNullIfLocationIdAndNameAreIncorrect() throws HL7Exception {
  executeDataSet("org/openmrs/hl7/include/ORUTest-initialData.xml");
  HL7Service hl7service = Context.getHL7Service();
  Message message = hl7service
      .parseHL7String("MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r"
          + "PID|||3^^^^||John3^Doe^||\r"
          + "NK1|1|Hornblower^Horatio^L|2B^Sibling^99REL||||||||||||M|19410501|||||||||||||||||1000^^^L^PN||||\r"
          + "PV1||O|99999^0^0^0&Unknown&0||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r"
          + "ORC|RE||||||||20080226102537|1^Super User\r"
          + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r"
          + "OBX|1|NM|5497^CD4, BY FACS^99DCT||450|||||||||20080206\r"
          + "OBX|2|DT|5096^RETURN VISIT DATE^99DCT||20080229|||||||||20080212");
  ORU_R01 oru = (ORU_R01) message;
  PV1 pv1 = oru.getPATIENT_RESULT().getPATIENT().getVISIT().getPV1();
  Assert.assertNotNull("PV1 parsed as null", pv1);
  PL hl7Location = pv1.getAssignedPatientLocation();
  Integer locationId = hl7service.resolveLocationId(hl7Location);
  Assert.assertNull(locationId);
}

/**
 * @throws HL7Exception
 * @see HL7Service#resolveUserId(ca.uhn.hl7v2.model.v25.datatype.XCN)
 */
@Test
public void resolveUserId_shouldReturnNullForAmbiguousUsersUsingFirstAndLastNameGivenUserIDIsNull() throws HL7Exception {
  HL7Service hl7service = Context.getHL7Service();
  executeDataSet(XML_FILENAME);
  //construct a message such that id Number at ORC is null
  Message message = hl7service
               .parseHL7String("MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" +
                       "PID|||3^^^^||John3^Doe^||\r" +
                       "NK1|1|Hornblower^Horatio^L|2B^Sibling^99REL||||||||||||M|19410501|||||||||||||||||1000^^^L^PN||||\r" +
                       "PV1||O|99999^0^0^0&Unknown&0||||^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" +
                       "ORC|RE||||||||20080226102537|^User^Super\r" +
                       "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" +
                       "OBX|1|NM|5497^CD4, BY FACS^99DCT||450|||||||||20080206\r" +
                       "OBX|2|DT|5096^RETURN VISIT DATE^99DCT||20080229|||||||||20080212");
  ORU_R01 oru = (ORU_R01) message;
  ORC orc = oru.getPATIENT_RESULT().getORDER_OBSERVATION().getORC();
  XCN xcn = orc.getEnteredBy(0);
  //userId should be null since there exist two ambiguous users that has givename=Super and lastname=User.
  Integer userId = hl7service.resolveUserId(xcn);
  Assert.assertNull(userId);
}

/**
 * Returns
 * the first repetition of 
 * NK1 (Next of Kin / Associated Parties) - creates it if necessary
 */
public NK1 getNK1() { 
  NK1 retVal = getTyped("NK1", NK1.class);
  return retVal;
}

Most used classes

ORU_R01_ORDER_OBSERVATION
Represents a ORU_R01_ORDER_OBSERVATION group structure (a Group object). A Group is an ordered colle
ORU_R01_PATIENT_RESULT
Represents a ORU_R01_PATIENT_RESULT group structure (a Group object). A Group is an ordered collecti
ORU_R01_OBSERVATION
Represents a ORU_R01_OBSERVATION group structure (a Group object). A Group is an ordered collection
ORU_R01_PATIENT
Represents a ORU_R01_PATIENT group structure (a Group object). A Group is an ordered collection of m
ORU_R01_VISIT
Represents a ORU_R01_VISIT group structure (a Group object). A Group is an ordered collection of mes

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