How to use
isCvTopicPublic
method
in
uk.ac.ebi.intact.model.util.AnnotatedObjectUtils

Best Java code snippets using uk.ac.ebi.intact.model.util.AnnotatedObjectUtils.isCvTopicPublic (Showing top 2 results out of 315)

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}

public static Collection<Annotation> getPublicAnnotations(final AnnotatedObject<?, ?> annotatedObject) {
  final Collection<Annotation> publicAnnotations = new ArrayList<Annotation>(annotatedObject.getAnnotations().size());
  final Iterator<Annotation> i = IntactCore.ensureInitializedAnnotations(annotatedObject).iterator();
  while (i.hasNext()) {
    Annotation annotation = i.next();
    if (isCvTopicPublic(annotation.getCvTopic())) {
      publicAnnotations.add(annotation);
    }
  }
  return publicAnnotations;
}

public static Collection<Annotation> getPublicAnnotations(final AnnotatedObject<?, ?> annotatedObject) {
  final Collection<Annotation> publicAnnotations = new ArrayList<Annotation>(annotatedObject.getAnnotations().size());
  final Iterator<Annotation> i = IntactCore.ensureInitializedAnnotations(annotatedObject).iterator();
  while (i.hasNext()) {
    Annotation annotation = i.next();
    if (isCvTopicPublic(annotation.getCvTopic())) {
      publicAnnotations.add(annotation);
    }
  }
  return publicAnnotations;
}

Popular methods of AnnotatedObjectUtils

getAliasClassType
Gets the generic Xref type for an AnnotatedObject class
getXrefClassType
Gets the generic Xref type for an AnnotatedObject class
findAnnotationByTopicMiOrLabel
Finds an Annotations with a topic that has an MI or label equal to the value provided
getParameterizedType
prepareShortLabel
Trims a shortlabel if it is too long to be inserted in the database.
searchXrefs
Retrieve the xrefs from an annotated object that comply with the filter.
areCollectionEqual
Method to compare Annotation, Xref and Aliases collections
containSameAliases
containSameAnnotations
containSameCollections
Checks if two given annotated objects contain the same set of annotations, xrefs and aliases
containSameXrefs
containTheSameXrefs
Check if the passed annotated objects contain the same set of filtered Xrefs.

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How to use isCvTopicPublicmethodin uk.ac.ebi.intact.model.util.AnnotatedObjectUtils

Best Java code snippets using uk.ac.ebi.intact.model.util.AnnotatedObjectUtils.isCvTopicPublic (Showing top 2 results out of 315)

How to use
isCvTopicPublic
method
in
uk.ac.ebi.intact.model.util.AnnotatedObjectUtils