How to use

equals

method

in

uk.ac.ebi.intact.model.AnnotatedObjectImpl

public boolean equals(Object o) {
  if ( this == o ) {
    return true;
  }
  if ( !( o instanceof Institution ) ) {
    return false;
  }
  if ( !super.equals( o ) ) {
    return false;
  }
  Institution that = (Institution) o;
  return true;
}

public boolean equals(Object o) {
  if ( this == o ) {
    return true;
  }
  if ( !( o instanceof Institution ) ) {
    return false;
  }
  if ( !super.equals( o ) ) {
    return false;
  }
  Institution that = (Institution) o;
  return true;
}

@Override
public boolean equals( Object o ) {
  if ( this == o ) {
    return true;
  }
  if ( o == null || getClass() != o.getClass() ) {
    return false;
  }
  if ( !super.equals( o ) ) {
    return false;
  }
  // shouldn't we be relying on the Xrefs solely ??
  // annotated object's equals relies on shortlabel, fullname and xrefs !!
  // one publication Xref in common should be enough ! either pmid, doi as primary-reference
  return true;
}

/**
 * Equality for BioSources is currently based on equality for <code>AnnotatedObjects</code> and taxIds (String
 * representation of an integer).
 *
 * @param o The object to check
 *
 * @return true if the parameter equals this object, false otherwise
 *
 * @see uk.ac.ebi.intact.model.AnnotatedObjectImpl
 */
@Override
public boolean equals( Object o ) {
  if ( this == o ) {
    return true;
  }
  if ( !( o instanceof BioSource ) ) {
    return false;
  }
  if ( !super.equals( o ) ) {
    return false;
  }
  final BioSource bioSource = ( BioSource ) o;
  if ( taxId == null ) {
    return false;
  }
  return ( taxId.equals( bioSource.getTaxId() ) );
}

/**
 * Equality for BioSources is currently based on equality for <code>AnnotatedObjects</code> and taxIds (String
 * representation of an integer).
 *
 * @param o The object to check
 *
 * @return true if the parameter equals this object, false otherwise
 *
 * @see uk.ac.ebi.intact.model.AnnotatedObjectImpl
 */
@Override
public boolean equals( Object o ) {
  if ( this == o ) {
    return true;
  }
  if ( !( o instanceof BioSource ) ) {
    return false;
  }
  if ( !super.equals( o ) ) {
    return false;
  }
  final BioSource bioSource = ( BioSource ) o;
  if ( taxId == null ) {
    return false;
  }
  return ( taxId.equals( bioSource.getTaxId() ) );
}

/**
 * Equality for BioSources is currently based on equality for <code>AnnotatedObjects</code> and taxIds (String
 * representation of an integer).
 *
 * @param o The object to check
 *
 * @return true if the parameter equals this object, false otherwise
 *
 * @see uk.ac.ebi.intact.model.AnnotatedObjectImpl
 */
@Override
public boolean equals( Object o ) {
  if ( this == o ) {
    return true;
  }
  if ( !( o instanceof BioSource ) ) {
    return false;
  }
  if ( !super.equals( o ) ) {
    return false;
  }
  final BioSource bioSource = ( BioSource ) o;
  if ( taxId == null ) {
    return false;
  }
  return ( taxId.equals( bioSource.getTaxId() ) );
}

@Override
public boolean equals( Object o ) {
  if ( !super.equals( o ) ) {
    return false;
  }
  if ( this == o ) {
    return true;
  }
  if ( o == null || getClass() != o.getClass() ) {
    return false;
  }
  final InteractorImpl that = ( InteractorImpl ) o;
  if ( activeInstances != null ? !activeInstances.equals( that.activeInstances ) : that.activeInstances != null ) {
    return false;
  }
  if ( bioSource != null ? !bioSource.equals( that.bioSource ) : that.bioSource != null ) {
    return false;
  }
  if ( interactorType != null ? !interactorType.equals( that.interactorType ) : that.interactorType != null ) {
    return false;
  }
  return true;
}

/**
 * Equality for Experiments is currently based on equality for <code>AnnotatedObjects</code> and BioSources only.
 *
 * @param o The object to check
 *
 * @return true if the parameter equals this object, false otherwise
 *
 * @see AnnotatedObject
 */
@Override
public boolean equals( Object o ) {
  if ( this == o ) {
    return true;
  }
  if ( o == null || getClass() != o.getClass() ) {
    return false;
  }
  if ( !super.equals( o ) ) {
    return false;
  }
  final Experiment that = ( Experiment ) o;
  if ( !bioSource.equals( that.bioSource ) ) {
    return false;
  }
  if ( publication != null ? !publication.equals( that.publication ) : that.publication != null ) {
    return false;
  }
  return true;
}

/**
 * Equality for CvObject is currently based on equality for primary id of Xref having the qualifier of identity and
 * short label if there is xref of identity. We need to equals method to avoid circular references when invoking
 * equals methods
 *
 * @param obj The object to check
 *
 * @return true if given object has an identity xref and its primary id matches to this' object's primary id or
 *         short label if there is no identity xref.
 *
 * @see Xref
 */
@Override
public boolean equals( Object obj ) {
  if ( !( obj instanceof CvObject ) ) {
    return false;
  }
  final CvObject other = ( CvObject ) obj;
  if (!getObjClass().equals(other.getObjClass())) {
    return false;
  }
  if (( identifier != null && !identifier.equals(other.getIdentifier()))) {
    return false;
  }
  return super.equals(other);
}

/**
 * Equality for CvObject is currently based on equality for primary id of Xref having the qualifier of identity and
 * short label if there is xref of identity. We need to equals method to avoid circular references when invoking
 * equals methods
 *
 * @param obj The object to check
 *
 * @return true if given object has an identity xref and its primary id matches to this' object's primary id or
 *         short label if there is no identity xref.
 *
 * @see Xref
 */
@Override
public boolean equals( Object obj ) {
  if ( !( obj instanceof CvObject ) ) {
    return false;
  }
  final CvObject other = ( CvObject ) obj;
  if (!getObjClass().equals(other.getObjClass())) {
    return false;
  }
  if (( identifier != null && !identifier.equals(other.getIdentifier()))) {
    return false;
  }
  return super.equals(other);
}

if ( !super.equals( obj ) ) {
  return false;

  return false;
if ( !super.equals( o ) ) {
  return false;

public boolean equals( Object o, boolean includeLinkedFeature, boolean includeRanges ) {
  if ( this == o ) return true;
  if ( !( o instanceof Feature ) ) return false;
  if ( !super.equals( o ) ) return false;

public boolean equals( Object o, boolean includeLinkedFeature, boolean includeRanges ) {
  if ( this == o ) return true;
  if ( !( o instanceof Feature ) ) return false;
  if ( !super.equals( o ) ) return false;

if ( !super.equals( o ) ) {
  return false;

if ( !super.equals( o ) ) {
  return false;