How to use
ensureInitializedRanges
method
in
uk.ac.ebi.intact.core.persister.IntactCore

Best Java code snippets using uk.ac.ebi.intact.core.persister.IntactCore.ensureInitializedRanges (Showing top 3 results out of 315)

ranges = IntactCore.ensureInitializedRanges(intactObject);

public Feature cloneFeature(Feature feature) throws IntactClonerException {
  if (feature == null) return null;
  Feature clone = new Feature();
  clonerManager.addClone(feature, clone);
  clone.setOwner(clone(feature.getOwner()));
  clone.setShortLabel(feature.getShortLabel());
  clone.setCvFeatureType(clone(feature.getCvFeatureType()));
  clone.setCvFeatureIdentification(clone(feature.getCvFeatureIdentification()));
  if (isCollectionClonable(feature.getRanges())) {
    Collection<Range> ranges = IntactCore.ensureInitializedRanges(feature);
    for (Range range : ranges) {
      clone.addRange(clone(range));
    }
  }
  clone.setComponent(clone(feature.getComponent()));
  return clone;
}

public Feature cloneFeature(Feature feature) throws IntactClonerException {
  if (feature == null) return null;
  Feature clone = new Feature();
  clonerManager.addClone(feature, clone);
  clone.setOwner(clone(feature.getOwner()));
  clone.setShortLabel(feature.getShortLabel());
  clone.setCvFeatureType(clone(feature.getCvFeatureType()));
  clone.setCvFeatureIdentification(clone(feature.getCvFeatureIdentification()));
  if (isCollectionClonable(feature.getRanges())) {
    Collection<Range> ranges = IntactCore.ensureInitializedRanges(feature);
    for (Range range : ranges) {
      clone.addRange(clone(range));
    }
  }
  clone.setComponent(clone(feature.getComponent()));
  return clone;
}

Javadoc

Retrieves the ranges from a feature, initializing them if necessary.

Popular methods of IntactCore

ensureInitializedAliases
Retrieves the aliases from an AnnotatedObject, initializing them if necessary.
ensureInitializedAnnotations
Retrieves the annotations from an AnnotatedObject, initializing them if necessary.
ensureInitializedComponentConfidences
Retrieves the confidences from a participant, initializing them if necessary. Do not set the initial
ensureInitializedComponentParameters
Retrieves the parameters from a participant, initializing them if necessary. Do not set the initiali
ensureInitializedConfidences
Retrieves the confidences from an interaction, initializing them if necessary. Do not set the initia
ensureInitializedExperimentalPreparations
Retrieves the experimental preparations from a participant, initializing them if necessary. Do not s
ensureInitializedExperimentalRoles
Retrieves the experimental roles from a participant, initializing them if necessary. Do not set the
ensureInitializedExperiments
Retrieves the experiment from a publication, initializing them if necessary.
ensureInitializedFeatures
Retrieves the features from a participant, initializing them if necessary. Do not set the initialize
ensureInitializedInteractionParameters
Retrieves the parameters from an interaction, initializing them if necessary. Do not set the initial
ensureInitializedParticipantIdentificationMethods
Retrieves the participant detection methods from a participant, initializing them if necessary. Do n
ensureInitializedParticipants
Retrieves the components from an interaction, initializing them if necessary. Do not set the initial

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How to use ensureInitializedRangesmethodin uk.ac.ebi.intact.core.persister.IntactCore

Best Java code snippets using uk.ac.ebi.intact.core.persister.IntactCore.ensureInitializedRanges (Showing top 3 results out of 315)

How to use
ensureInitializedRanges
method
in
uk.ac.ebi.intact.core.persister.IntactCore