How to use
hasPsiXref
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.CvObject2xmlPSI2

Best Java code snippets using uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.CvObject2xmlPSI2.hasPsiXref (Showing top 4 results out of 315)

if ( hasPsiXref( cvObject, CvComponentRole.BAIT_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.PREY_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.NEUTRAL_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.SELF_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.ENZYME_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getNeutral();
} else if ( hasPsiXref( cvObject, CvComponentRole.ENZYME_TARGET_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getNeutral();
} else if ( hasPsiXref( cvObject, CvComponentRole.UNSPECIFIED_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getNeutral();
} else {

if ( hasPsiXref( cvObject, CvComponentRole.BAIT_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.PREY_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.NEUTRAL_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.SELF_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.ENZYME_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getNeutral();
} else if ( hasPsiXref( cvObject, CvComponentRole.ENZYME_TARGET_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getNeutral();
} else if ( hasPsiXref( cvObject, CvComponentRole.UNSPECIFIED_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getNeutral();
} else {

if ( hasPsiXref( cvObject, CvComponentRole.BAIT_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getUnspecified();
} else if ( hasPsiXref( cvObject, CvComponentRole.PREY_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getUnspecified();
} else if ( hasPsiXref( cvObject, CvComponentRole.NEUTRAL_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getUnspecified();
} else if ( hasPsiXref( cvObject, CvComponentRole.SELF_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.ENZYME_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.ENZYME_TARGET_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.UNSPECIFIED_PSI_REF ) ) {
  newCvObject = cvObject;
} else {

if ( hasPsiXref( cvObject, CvComponentRole.BAIT_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getUnspecified();
} else if ( hasPsiXref( cvObject, CvComponentRole.PREY_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getUnspecified();
} else if ( hasPsiXref( cvObject, CvComponentRole.NEUTRAL_PSI_REF ) ) {
  newCvObject = IntactContext.getCurrentInstance().getCvContext().getUnspecified();
} else if ( hasPsiXref( cvObject, CvComponentRole.SELF_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.ENZYME_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.ENZYME_TARGET_PSI_REF ) ) {
  newCvObject = cvObject;
} else if ( hasPsiXref( cvObject, CvComponentRole.UNSPECIFIED_PSI_REF ) ) {
  newCvObject = cvObject;
} else {

Popular methods of CvObject2xmlPSI2

createCertainStatus
createCvObjectXrefs
Create PSI Xrefs from an IntAct cvObject. Put Xref(psi-mi, identity) as primaryRef, any other as se
createEndCertainStatus
createEndStatus
createNames
createStartCertainStatus
createStartStatus
createStatus
getInstance
getXmlFromCache
Checks if the given CvObject has already been generated as XML content. If so, that content is clon
updateCache
Store in the cache the XML representation related to the given CvObject instance.
createBiologicalRole

Popular in Java

Running tasks concurrently on multiple threads
orElseThrow (Optional)
Return the contained value, if present, otherwise throw an exception to be created by the provided s
getContentResolver (Context)
scheduleAtFixedRate (Timer)
Socket (java.net)
Provides a client-side TCP socket.
Date (java.sql)
A class which can consume and produce dates in SQL Date format. Dates are represented in SQL as yyyy
StringTokenizer (java.util)
Breaks a string into tokens; new code should probably use String#split.> // Legacy code: StringTo
Reference (javax.naming)
FileUtils (org.apache.commons.io)
General file manipulation utilities. Facilities are provided in the following areas: * writing to a
Logger (org.slf4j)
The org.slf4j.Logger interface is the main user entry point of SLF4J API. It is expected that loggin
From CI to AI: The AI layer in your organization

How to use hasPsiXrefmethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.CvObject2xmlPSI2

Best Java code snippets using uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.CvObject2xmlPSI2.hasPsiXref (Showing top 4 results out of 315)

How to use
hasPsiXref
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.CvObject2xmlPSI2