Public

Create the experimentalForm corresponding to the participant we are being given
the participantId.

createExperimentalForm

Generate the XML content of a proteinParticipant as well as the experimentalForm
based on the given 

createProteinExperimentalForm

Generate the XMl content of a proteinParticipant as well as the experimentalForm
based on the given 

createProteinParticipant

Generate the XMl content of a SmallMolecule based on the given component.

createSmallMoleculeParticipant

getInstance

get the value what will be used as ID of the experiment.

getParticipantId

Check that the given feature type is a tag.

isTaggedFeature

Point

Making http post requests using okhttp

Java representation of an SQL TIME value. Provides utilities to format and parse
the time's represen

java.sql.Time

The base class for all formats. This is an abstract base class which specifies
the protocol for clas

java.text.Format

This class contains various methods for manipulating arrays (such as sorting and
searching). This cl

java.util.Arrays

A TimeUnit represents time durations at a given unit of granularity and provides
utility methods to 

java.util.concurrent.TimeUnit

Provides an abstract class to be subclassed to create an HTTP servlet suitable
for a Web site. A sub

javax.servlet.http.HttpServlet

Defines the contract between a returned instance and the runtime when an
application needs to provid

javax.ws.rs.core.Response

scheduleAtFixedRate

getSupportFragmentManager

findViewById

/**
     * Generated an interaction out of an IntAct Interaction.
     *
     * @param session
     * @param parent      the Element to which we will add the proteinInteractor.
     * @param interaction the IntAct Interaction that we convert to PSI.
     *
     * @return the generated interaction Element.
     */

"You must give a non null UserSessionDownload."

"You must give a non null parent to build an "

"You must give a <interactionList> to build a "

"You must give a non null Interaction to build an "

// we start participant id from scratch again

//        session.resetParticipantIdentifier();

//       availabilityRef [or] availability

// only generate it if the definition doesn't exist.

// add the experiment definition to the global list of experiments

// add an experimentRef to the local list.

//    this is actually done at the same time that participantList

// 9. Generating inferredInteractionList...

// todo check that we are not generating it twice !!

// check that we are not generating several times the same features

// we already have generated that inferred interaction, skip it.

// that feature binds to an other one ... generate an Inferred interaction.

// CvInteractionType is optional in the intact model.

// if interaction or experiment is negative (Annotation), true, otherwise false.

How to use createExperimentalFormmethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.Component2xmlPSI2

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How to use
createExperimentalForm
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.Component2xmlPSI2