Public

createAttributeList

generate the bibliographical reference of the Experiment out of the Xref having
the CvDatabase pubme

createBibRef

createConfidence

Generate and add to the given element the Xrefs of the experiment (but no
pubmed). 
The given set of

createExperimentXrefs

createNames

get the value what will be used as ID of the experiment.

getExperimentId

getInstance

LocalDateTime

Reactive rest calls using spring rest template

Wraps an existing Writer and buffers the output. Expensive interaction with the
underlying reader is

java.io.BufferedWriter

A concrete subclass of NumberFormat that formats decimal numbers. It has a
variety of features desig

java.text.DecimalFormat

A collection designed for holding elements prior to processing. Besides basic
java.util.Collection o

java.util.Queue

Defines the contract between a returned instance and the runtime when an
application needs to provid

javax.ws.rs.core.Response

General file manipulation utilities. Facilities are provided in the following
areas: * writing to a 

org.apache.commons.io.FileUtils

scala.Option

onRequestPermissionsResult

scheduleAtFixedRate

getResourceAsStream

/**
     * Generated an experimentDescription out of an IntAct Experiment.
     *
     * @param session
     * @param parent     the Element to which we will add the experimentDescription.
     * @param experiment the IntAct experiment that we convert to PSI.
     *
     * @return the generated experimentDescription Element.
     */

"You must give a non null UserSessionDownload."

"You must give a non null parent to build an experimentDescription."

"You must give a <experimentList> to build a "

"You must give a non null Experiment to build an experimentDescription."

//       names bibref xref hostOrganism interactionDetection participantDetection featureDetection confidence attributeList

// TODO what if no pubmed Xref ... no bibRef section ?

// 7. Generating OPTIONAL interactionDetection ... mapped to Experiment.CvInteraction.

// 8. Generating OPTIONAL participantDetection ... mapped to Experiment.CvIdentification.

// 9. Generating OPTIONAL featureDetection...

// actually, we have (so far) nothing like that in the IntAct Experiment object ... skip that tag.

// 12. Generating attributeList (if any)...

// 12. Attaching the newly created element to the parent...

How to use createNamesmethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi1.Experiment2xmlPSI1

Best Java code snippets using uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi1.Experiment2xmlPSI1.createNames (Showing top 3 results out of 315)

How to use
createNames
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi1.Experiment2xmlPSI1