Public

createAttributeList

generate the bibliographical reference of the Experiment out of the Xref having
the CvDatabase pubme

createBibRef

createConfidence

Generate and add to the given element the Xrefs of the experiment (but no
pubmed). 
The given set of

createExperimentXrefs

createNames

get the value what will be used as ID of the experiment.

getExperimentId

getInstance

LocalDateTime

Running tasks concurrently on multiple threads

A border layout lays out a container, arranging and resizing its components to
fit in five regions: 

java.awt.BorderLayout

Thrown when a program encounters the end of a file or stream during an input
operation.

java.io.EOFException

This exception is thrown when a timeout expired on a socket read or accept
operation.

java.net.SocketTimeoutException

An ordered collection (also known as a sequence). The user of this interface has
precise control ove

java.util.List

SortedSet is a Set which iterates over its elements in a sorted order. The order
is determined eithe

java.util.SortedSet

TreeSet is an implementation of SortedSet. All optional operations (adding and
removing) are support

java.util.TreeSet

findViewById

putExtra

onRequestPermissionsResult

/**
     * Generated an experimentDescription out of an IntAct Experiment.
     *
     * @param session
     * @param parent     the Element to which we will add the experimentDescription.
     * @param experiment the IntAct experiment that we convert to PSI.
     *
     * @return the generated experimentDescription Element.
     */

"You must give a non null UserSessionDownload."

"You must give a non null parent to build an experimentDescription."

"You must give a <experimentList> to build a "

"You must give a non null Experiment to build an experimentDescription."

//       names bibref xref hostOrganism interactionDetection participantDetection featureDetection confidence attributeList

// TODO what if no pubmed Xref ... no bibRef section ?

// 7. Generating OPTIONAL interactionDetection ... mapped to Experiment.CvInteraction.

// 8. Generating OPTIONAL participantDetection ... mapped to Experiment.CvIdentification.

// 9. Generating OPTIONAL featureDetection...

// actually, we have (so far) nothing like that in the IntAct Experiment object ... skip that tag.

// 12. Generating attributeList (if any)...

// 12. Attaching the newly created element to the parent...

How to use createConfidencemethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi1.Experiment2xmlPSI1

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How to use
createConfidence
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi1.Experiment2xmlPSI1