Public

createAttributeList

generate the bibliographical reference of the Experiment out of the Xref having
the CvDatabase pubme

createBibRef

createConfidence

Generate and add to the given element the Xrefs of the experiment (but no
pubmed). 
The given set of

createExperimentXrefs

createNames

get the value what will be used as ID of the experiment.

getExperimentId

getInstance

LocalDateTime

Creating JSON documents from java classes using gson

java.lang.String

An object that executes submitted Runnable tasks. This interface provides a way
of decoupling task s

java.util.concurrent.Executor

The Manifest class is used to obtain attribute information for a JarFile and its
entries.

java.util.jar.Manifest

javax.swing.JFrame

javax.swing.JLabel

The org.slf4j.Logger interface is the main user entry point of SLF4J API. It is
expected that loggin

org.slf4j.Logger

onCreateOptionsMenu

Return the contained value, if present, otherwise throw an exception to be
created by the provided s

orElseThrow

getSupportFragmentManager

/**
     * Generated an experimentDescription out of an IntAct Experiment.
     *
     * @param session
     * @param parent     the Element to which we will add the experimentDescription.
     * @param experiment the IntAct experiment that we convert to PSI.
     *
     * @return the generated experimentDescription Element.
     */

"You must give a non null UserSessionDownload."

"You must give a non null parent to build an experimentDescription."

"You must give a <experimentList> to build a "

"You must give a non null Experiment to build an experimentDescription."

//       names bibref xref hostOrganism interactionDetection participantDetection featureDetection confidence attributeList

// TODO what if no pubmed Xref ... no bibRef section ?

// 7. Generating OPTIONAL interactionDetection ... mapped to Experiment.CvInteraction.

// 8. Generating OPTIONAL participantDetection ... mapped to Experiment.CvIdentification.

// 9. Generating OPTIONAL featureDetection...

// actually, we have (so far) nothing like that in the IntAct Experiment object ... skip that tag.

// 12. Generating attributeList (if any)...

// 12. Attaching the newly created element to the parent...

How to use createAttributeListmethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi1.Experiment2xmlPSI1

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How to use
createAttributeList
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi1.Experiment2xmlPSI1