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ExperimentListGenerator.createItemClassificationByDataset
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How to use
createItemClassificationByDataset
method
in
uk.ac.ebi.intact.application.dataConversion.ExperimentListGenerator

Best Java code snippets using uk.ac.ebi.intact.application.dataConversion.ExperimentListGenerator.createItemClassificationByDataset (Showing top 3 results out of 315)

origin: uk.ac.ebi.intact.dataexchange.psimi.legacy/data-conversion

public List<ExperimentListItem> generateClassificationByDatasets() {
  if ( !experimentsClassified ) {
    classifyExperiments();
  }
  if ( datasetsListItems != null && !datasetsListItems.isEmpty() ) {
    return datasetsListItems;
  }
  createItemClassificationByDataset();
  return datasetsListItems;
}
origin: uk.ac.ebi.intact.util/data-conversion

public List<ExperimentListItem> generateClassificationByDatasets() {
  if ( !experimentsClassified ) {
    classifyExperiments();
  }
  if ( datasetsListItems != null && !datasetsListItems.isEmpty() ) {
    return datasetsListItems;
  }
  createItemClassificationByDataset();
  return datasetsListItems;
}
origin: uk.ac.ebi.intact.app/data-conversion

public List<ExperimentListItem> generateClassificationByDatasets() {
  if ( !experimentsClassified ) {
    classifyExperiments();
  }
  if ( datasetsListItems != null && !datasetsListItems.isEmpty() ) {
    return datasetsListItems;
  }
  createItemClassificationByDataset();
  return datasetsListItems;
}
uk.ac.ebi.intact.application.dataConversionExperimentListGeneratorcreateItemClassificationByDataset

Javadoc

Build the classification by dataset.
We keep the negative experiment separated from the non negative.

Popular methods of ExperimentListGenerator

  • addToList
  • classifyExperiments
    Classify experiments matching searchPattern into a data structure according to species and experimen
  • classifyNegatives
    Checks for a negative interaction. NB This will have to be done using SQL otherwise we end up materi
  • createExpListItems
  • createExperimentListItems
  • createItemClassificationByPubmed
    Build the classification by pubmed id. We keep the negative experiment separated from the non negati
  • createItemClassificationBySpecies
  • generateClassificationByPublications
  • generateClassificationBySpecies
  • getCreatedYear
    Given a set of Experiments, it returns the year of the date of creation of the oldest experiment.
  • getDaoFactory
  • getDatasets
    Fetch dataset information (if any) from experiment.
  • getDaoFactory,
  • getDatasets,
  • getExperiments,
  • getFilteredExperimentAcs,
  • getNegativeExperiments,
  • getPubmedId,
  • getTargetSpecies,
  • interactionsForExperiment,
  • isNegative

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