Public

Gets the value of the interactor property.

getInteractor

Gets the value of the experimentalRoleList property.

getExperimentalRoles

Gets the value of the featureList property.

getFeatures

Gets the value of the attributeList property.

getAttributes

Gets the value of the biologicalRole property.

getBiologicalRole

Gets the value of the experimentalInteractorList property.

getExperimentalInteractors

getId

getInteraction

Gets the value of the participantIdentificationMethodList property.

getParticipantIdentificationMethods

Check if the optional experimentalRoles is defined.

hasExperimentalRoles

Sets the value of the biologicalRole property.

setBiologicalRole

Sets the value of the interactor property.

setInteractor

<init>

Gets the value of the confidenceList property.

getConfidenceList

Gets the value of the experimentalPreparationList property.

getExperimentalPreparations

Gets the value of the hostOrganismList property.

getHostOrganisms

getNames

Gets the value of the parameterList property.

getParameters

getXref

Check if the optional attributes is defined.

hasAttributes

SimpleDateFormat

Making http post requests using okhttp

A controller for the selection of SelectableChannel objects. Selectable channels
can be registered w

java.nio.channels.Selector

 Collection is the root of the collection hierarchy. It defines operations on
data collections and t

java.util.Collection

Vector is an implementation of List, backed by an array and synchronized. All
optional operations in

java.util.Vector

A java.util.Queue that additionally supports operations that wait for the queue
to become non-empty 

java.util.concurrent.BlockingQueue

A counting semaphore. Conceptually, a semaphore maintains a set of permits. Each
#acquire blocks if 

java.util.concurrent.Semaphore

javax.swing.JOptionPane

addToBackStack

getSupportFragmentManager

compareTo

// Set id, annotations, xrefs and aliases

"Component without experimental roles : "

"Found component without biological role: "

// in case of author-score and for retro-compatibility, we add an author-confidence annotation

/**
     * Browse the given participant and replaces all reference by the respective object.
     *
     * @param fis         fis the file to read objects from.
     * @param participant the participant to update.
     * @throws PsimiXmlReaderException
     */

") which is an interaction and this interaction is referring to itself."

" but this interaction cannot be found by the parser. Please check that this interaction is described somewhere in the list of interactions."

") doesn't have any interactions attached to it."

"Error while extracting XML snippet for interactor"

" but this interactior cannot be found by the parser. "

"Please check that you are not mixing the expanded PSI xml schema and the compact PSI xml schema together. Either all the interactors are described at the beginning of the file and"

" all the participants then use references to pre-declared interactors or all the interactors are only described at the level of the participants and no interactor reference can be used."

") has a participant identification method which refers to experiment ref "

"however, this experiment isn't defined in this interaction."

" This is not a supported use of the PSI-MI XML format."

" has a participant identification method which refers to the experiment "

" but this experiment cannot be found by the parser."

" Please check that you are not mixing the expanded PSI xml schema and the compact PSI xml schema together. Either all the experiments are described at the beginning of the file and"

" all the interactions and participants then use references to pre-declared experiments or all the experiments are only described at the level of the interactions and no experiment reference can be used."

") has an experimental role which refers to experiment ref "

" has an experimental role which refers to the experiment "

"You must give a non null JAXB Participant."

// Initialise the model reading the Jaxb object

"Could not find either an interactor or an interaction for participant (id="

// We handle interaction's and participant's parameters as they may be different JAXB Type.

// psidev.psi.mi.xml254.jaxb.InteractionElementType.ParameterList.Parameter

// TODO once the schema is fixed, revert to a single converter.

// psidev.psi.mi.xml253.jaxb.ParticipantType.ParameterList.Parameter

// psidev.psi.mi.xml253.jaxb.InteractionElementType.ParameterList.Parameter

How to use setInteractionRefmethodin psidev.psi.mi.xml.model.Participant

Best Java code snippets using psidev.psi.mi.xml.model.Participant.setInteractionRef (Showing top 4 results out of 315)

How to use
setInteractionRef
method
in
psidev.psi.mi.xml.model.Participant