protected CvType( Names names, Xref xref ) { setNames( names ); setXref( xref ); }
public static <C extends CvType> C createCvType(Class<C> cvTypeClass, String miRef, String label) { C cv = createCvType(cvTypeClass, label); cv.setXref(createXrefPsiMi(miRef)); return cv; }
mOpenCvType.setXref( xrefConverter.fromJaxb( jCvType.getXref() ) );
mOpenCvType.setXref( xrefConverter.fromJaxb( jCvType.getXref() ) );
private static <T extends CvType> T createUnspecifiedRole( Class<T> roleClass ) { T role; try { role = roleClass.newInstance(); } catch ( Exception e ) { throw new RuntimeException( e ); } Names names = new Names(); names.setShortLabel(CvExperimentalRole.UNSPECIFIED); names.setFullName(CvExperimentalRole.UNSPECIFIED); role.setNames( names ); Xref xref = new Xref(); String unspecifiedRoleMiRef = CvExperimentalRole.UNSPECIFIED_PSI_REF; DbReference dbRef = new DbReference( unspecifiedRoleMiRef, CvDatabase.PSI_MI ); dbRef.setRefType( CvXrefQualifier.IDENTITY ); dbRef.setRefTypeAc( CvXrefQualifier.IDENTITY_MI_REF ); dbRef.setDbAc( CvDatabase.PSI_MI_MI_REF ); xref.setPrimaryRef( dbRef ); role.setXref( xref ); return role; }
if (xref != null) myCv.setXref(xref);
if (xref != null) myCv.setXref(xref); } catch (Exception e) { throw new XmlConversionException("An exception was thrown while instanciating an xml.", e);