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ParticipantEvidence.getConfidences
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How to use
getConfidences
method
in
psidev.psi.mi.jami.model.ParticipantEvidence

Best Java code snippets using psidev.psi.mi.jami.model.ParticipantEvidence.getConfidences (Showing top 3 results out of 315)

origin: psidev.psi.mi.jami/jami-core

target.getAnnotations().clear();
target.getAnnotations().addAll(source.getAnnotations());
target.getConfidences().clear();
target.getConfidences().addAll(source.getConfidences());
target.getXrefs().clear();
target.getXrefs().addAll(source.getXrefs());
origin: psidev.psi.mi.jami/jami-interactionviewer-json

if (!object.getConfidences().isEmpty()){
  MIJsonUtils.writeSeparator(getWriter());
  MIJsonUtils.writePropertyKey("confidences", getWriter());
  MIJsonUtils.writeOpenArray(getWriter());
  Iterator<Confidence> confIterator = object.getConfidences().iterator();
  while (confIterator.hasNext()){
    getConfidenceWriter().write(confIterator.next());
origin: psidev.psi.mi/psimi-schema-validator

for (Confidence c : p.getConfidences()){
  checkConfidence(messages, c, p, "participant");
psidev.psi.mi.jami.modelParticipantEvidencegetConfidences

Javadoc

The confidences for this participant. The Collection cannot be null. If the participant does not have any confidences, the method should return an empty Collection. Ex: author based scores, statistical confidences, ...

Popular methods of ParticipantEvidence

  • getExperimentalRole
    The experimental role of the participant. It is a controlled vocabulary term and cannot be null. It
  • getIdentificationMethods
    The identification methods for this participant. Each identification method is a controlled vocabula
  • getAnnotations
  • getExpressedInOrganism
    The organisms in which the participant has been expressed. It can be null if not relevant or same as
  • getInteractor
  • getParameters
    Numerical parameters associated with this participant. The Collection cannot be null. If the partici
  • getAliases
  • getBiologicalRole
  • getExperimentalPreparations
    The experimental preparations for this participant. Each experimental preparation is a controlled vo
  • getFeatures
  • getInteraction
  • getXrefs
  • getInteraction,
  • getXrefs,
  • addFeature,
  • getCausalRelationships,
  • getStoichiometry,
  • setBiologicalRole,
  • setExperimentalRole,
  • setExpressedInOrganism,
  • setInteraction

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