/** * Applies translation using strict patterns * * @param tree the tree * @param translation the translation table * @return tree translated tree */ public static Tree renameNodes(Tree tree, Map<String, String> translation) { return renameNodes(tree, translation, true); }
final Tree tree = (Tree) entry.getValue(); String treeString = Newick.getStringFromTree(TreeUtils.renameNodes(tree, cs), false);