How to use

classesInSignature

method

in

org.semanticweb.owlapi.model.OWLOntology

  @Override
  protected Stream<OWLClass> getEntities(OWLOntology ont) {
    return ont.classesInSignature();
  }
}

  @Override
  protected Stream<OWLClass> getObjects(OWLOntology ont) {
    return ont.classesInSignature();
  }
}

  @Override
  protected Stream<OWLClass> getEntities(OWLOntology ont) {
    return ont.classesInSignature();
  }
}

  @Override
  protected Stream<OWLClass> getObjects(OWLOntology ont) {
    return ont.classesInSignature();
  }
}

  @Override
  protected Stream<OWLClass> getEntities(OWLOntology ont) {
    return ont.classesInSignature();
  }
}

@Override
public Double recomputeMetric() {
  AtomicInteger total = new AtomicInteger();
  AtomicInteger count = new AtomicInteger();
  Set<OWLClass> processedClasses = new HashSet<>();
  getOntologies().forEach(ont -> ont.classesInSignature().filter(processedClasses::add)
    .forEach(cls -> processClass(total, count, ont, cls)));
  return Double.valueOf((double) total.get() / count.get());
}

@Override
public Double recomputeMetric() {
  AtomicInteger total = new AtomicInteger();
  AtomicInteger count = new AtomicInteger();
  Set<OWLClass> processedClasses = new HashSet<>();
  getOntologies().forEach(ont -> ont.classesInSignature().filter(processedClasses::add)
    .forEach(cls -> processClass(total, count, ont, cls)));
  return Double.valueOf((double) total.get() / count.get());
}

@Override
public Double recomputeMetric() {
  AtomicInteger total = new AtomicInteger();
  AtomicInteger count = new AtomicInteger();
  Set<OWLClass> processedClasses = new HashSet<>();
  getOntologies().forEach(ont -> ont.classesInSignature().filter(processedClasses::add)
    .forEach(cls -> processClass(total, count, ont, cls)));
  return Double.valueOf((double) total.get() / count.get());
}

/**
 * Instantiates a new amalgamate sub class axioms.
 *
 * @param dataFactory the data factory
 * @param ontologies the ontologies to use
 */
public AmalgamateSubClassAxioms(OWLDataFactory dataFactory,
  Collection<OWLOntology> ontologies) {
  super(dataFactory);
  checkNotNull(ontologies, "ontologies cannot be null");
  ontologies.forEach(o -> o.classesInSignature().forEach(cls -> amalgamate(o, cls)));
}

/**
 * Instantiates a new amalgamate sub class axioms.
 *
 * @param dataFactory the data factory
 * @param ontologies the ontologies to use
 */
public AmalgamateSubClassAxioms(OWLDataFactory dataFactory,
  Collection<OWLOntology> ontologies) {
  super(dataFactory);
  checkNotNull(ontologies, "ontologies cannot be null");
  ontologies.forEach(o -> o.classesInSignature().forEach(cls -> amalgamate(o, cls)));
}

/**
 * Instantiates a new amalgamate sub class axioms.
 *
 * @param dataFactory the data factory
 * @param ontologies the ontologies to use
 */
public AmalgamateSubClassAxioms(OWLDataFactory dataFactory,
  Collection<OWLOntology> ontologies) {
  super(dataFactory);
  checkNotNull(ontologies, "ontologies cannot be null");
  ontologies.forEach(o -> o.classesInSignature().forEach(cls -> amalgamate(o, cls)));
}

@Override
public Integer recomputeMetric() {
  Set<OWLClass> processedClasses = new HashSet<>();
  OptionalLong max = getOntologies()
    .flatMapToLong(o -> o.classesInSignature().filter(processedClasses::add)
      .mapToLong(
        cls -> equivalent(o.equivalentClassesAxioms(cls), OWLClassExpression.class)
          .filter(d -> !d.isAnonymous()).count()))
    .max();
  return Integer.valueOf((int) max.orElse(0L));
}

@Override
public Integer recomputeMetric() {
  Set<OWLClass> processedClasses = new HashSet<>();
  OptionalLong max = getOntologies()
    .flatMapToLong(o -> o.classesInSignature().filter(processedClasses::add)
      .mapToLong(
        cls -> equivalent(o.equivalentClassesAxioms(cls), OWLClassExpression.class)
          .filter(d -> !d.isAnonymous()).count()))
    .max();
  return Integer.valueOf((int) max.orElse(0L));
}

@Override
public Integer recomputeMetric() {
  Set<OWLClass> processedClasses = new HashSet<>();
  OptionalLong max = getOntologies()
    .flatMapToLong(o -> o.classesInSignature().filter(processedClasses::add)
      .mapToLong(
        cls -> equivalent(o.equivalentClassesAxioms(cls), OWLClassExpression.class)
          .filter(d -> !d.isAnonymous()).count()))
    .max();
  return Integer.valueOf((int) max.orElse(0L));
}

@Override
public Integer recomputeMetric() {
  Set<OWLClass> processedClasses = new HashSet<>();
  OptionalLong max = getOntologies()
    .flatMapToLong(o -> o.classesInSignature().filter(processedClasses::add)
      .mapToLong(
        cls -> equivalent(o.equivalentClassesAxioms(cls), OWLClassExpression.class)
          .filter(d -> !d.isAnonymous()).count()))
    .max();
  return Integer.valueOf((int) max.orElse(0L));
}

protected Set<OWLEntity> getEntitiesThatRequireNamespaces() {
  Set<OWLEntity> result = new HashSet<>();
  add(result, ontology.classesInSignature());
  add(result, ontology.objectPropertiesInSignature());
  add(result, ontology.dataPropertiesInSignature());
  add(result, ontology.individualsInSignature());
  add(result, ontology.annotationPropertiesInSignature());
  return result;
}

protected Set<OWLEntity> getEntitiesThatRequireNamespaces() {
  Set<OWLEntity> result = new HashSet<>();
  add(result, ontology.classesInSignature());
  add(result, ontology.objectPropertiesInSignature());
  add(result, ontology.dataPropertiesInSignature());
  add(result, ontology.individualsInSignature());
  add(result, ontology.annotationPropertiesInSignature());
  return result;
}

private void renderInOntologySignatureEntities(Collection<IRI> illegalPuns) {
  renderEntities(ontology.annotationPropertiesInSignature(),
    ANNOTATION_PROPERTIES_BANNER_TEXT, illegalPuns);
  renderEntities(ontology.datatypesInSignature(), DATATYPES_BANNER_TEXT, illegalPuns);
  renderEntities(ontology.objectPropertiesInSignature(), OBJECT_PROPERTIES_BANNER_TEXT,
    illegalPuns);
  renderEntities(ontology.dataPropertiesInSignature(), DATA_PROPERTIES_BANNER_TEXT,
    illegalPuns);
  renderEntities(ontology.classesInSignature(), CLASSES_BANNER_TEXT, illegalPuns);
  renderEntities(ontology.individualsInSignature(), INDIVIDUALS_BANNER_TEXT, illegalPuns);
}

private void renderInOntologySignatureEntities(Collection<IRI> illegalPuns) {
  renderEntities(ontology.annotationPropertiesInSignature(),
    ANNOTATION_PROPERTIES_BANNER_TEXT, illegalPuns);
  renderEntities(ontology.datatypesInSignature(), DATATYPES_BANNER_TEXT, illegalPuns);
  renderEntities(ontology.objectPropertiesInSignature(), OBJECT_PROPERTIES_BANNER_TEXT,
    illegalPuns);
  renderEntities(ontology.dataPropertiesInSignature(), DATA_PROPERTIES_BANNER_TEXT,
    illegalPuns);
  renderEntities(ontology.classesInSignature(), CLASSES_BANNER_TEXT, illegalPuns);
  renderEntities(ontology.individualsInSignature(), INDIVIDUALS_BANNER_TEXT, illegalPuns);
}

private void renderInOntologySignatureEntities(Collection<IRI> illegalPuns) {
  renderEntities(ontology.annotationPropertiesInSignature(),
    ANNOTATION_PROPERTIES_BANNER_TEXT, illegalPuns);
  renderEntities(ontology.datatypesInSignature(), DATATYPES_BANNER_TEXT, illegalPuns);
  renderEntities(ontology.objectPropertiesInSignature(), OBJECT_PROPERTIES_BANNER_TEXT,
    illegalPuns);
  renderEntities(ontology.dataPropertiesInSignature(), DATA_PROPERTIES_BANNER_TEXT,
    illegalPuns);
  renderEntities(ontology.classesInSignature(), CLASSES_BANNER_TEXT, illegalPuns);
  renderEntities(ontology.individualsInSignature(), INDIVIDUALS_BANNER_TEXT, illegalPuns);
}