/** * Creates a wrapper of experimental role and biological role altogether that have methods to output * the meaningful label for both roles * * @param experimentalRole the experimental role to use * @param biologicalRole the biological role to use * @return the object containing both roles */ public static RoleInfo createRoleInfo(CvExperimentalRole experimentalRole, CvBiologicalRole biologicalRole) { return new RoleInfo(biologicalRole, experimentalRole); }
public String getRelevantMi() { if (relevantNameMi != null) { return relevantNameMi; } if (isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantNameMi = CvExperimentalRole.UNSPECIFIED_PSI_REF; } else if (isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantNameMi = getBiologicalRoleMi(); } else if (!isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantNameMi = getExperimentalRoleMi(); } else if (!isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantNameMi = getExperimentalRoleMi()+ RELEVANT_SEPARATOR +getBiologicalRoleMi(); } return relevantNameMi; }
public String getRelevantName() { if (relevantName != null) { return relevantName; } if (isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantName = CvExperimentalRole.UNSPECIFIED; } else if (isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantName = getBiologicalRole().getShortLabel(); } else if (!isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantName = getExperimentalRole().getShortLabel(); } else if (!isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantName = getExperimentalRole().getShortLabel()+ RELEVANT_SEPARATOR +getBiologicalRole().getShortLabel(); } return relevantName; }
public boolean isBiologicalRoleUnspecified() { return getBiologicalRoleMi().equals(CvBiologicalRole.UNSPECIFIED_PSI_REF); } }
public boolean isExperimentalRoleUnspecified() { return getExperimentalRoleMi().equals(CvExperimentalRole.UNSPECIFIED_PSI_REF); }
public String getRelevantName() { if (relevantName != null) { return relevantName; } if (isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantName = CvExperimentalRole.UNSPECIFIED; } else if (isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantName = getBiologicalRole().getShortLabel(); } else if (!isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantName = getExperimentalRole().getShortLabel(); } else if (!isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantName = getExperimentalRole().getShortLabel()+ RELEVANT_SEPARATOR +getBiologicalRole().getShortLabel(); } return relevantName; }
public boolean isBiologicalRoleUnspecified() { return getBiologicalRoleMi().equals(CvBiologicalRole.UNSPECIFIED_PSI_REF); } }
public boolean isExperimentalRoleUnspecified() { return getExperimentalRoleMi().equals(CvExperimentalRole.UNSPECIFIED_PSI_REF); }
public String getRelevantMi() { if (relevantNameMi != null) { return relevantNameMi; } if (isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantNameMi = CvExperimentalRole.UNSPECIFIED_PSI_REF; } else if (isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantNameMi = getBiologicalRoleMi(); } else if (!isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantNameMi = getExperimentalRoleMi(); } else if (!isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantNameMi = getExperimentalRoleMi()+ RELEVANT_SEPARATOR +getBiologicalRoleMi(); } return relevantNameMi; }
public String getRelevantName() { if (relevantName != null) { return relevantName; } if (isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantName = CvExperimentalRole.UNSPECIFIED; } else if (isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantName = getBiologicalRole().getShortLabel(); } else if (!isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantName = getExperimentalRole().getShortLabel(); } else if (!isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantName = getExperimentalRole().getShortLabel()+ RELEVANT_SEPARATOR +getBiologicalRole().getShortLabel(); } return relevantName; }
/** * Creates a wrapper of experimental role and biological role altogether that have methods to output * the meaningful label for both roles * @param experimentalRole the experimental role to use * @param biologicalRole the biological role to use * @return the object containing both roles */ public static RoleInfo createRoleInfo(CvExperimentalRole experimentalRole, CvBiologicalRole biologicalRole) { return new RoleInfo(biologicalRole, experimentalRole); }
public boolean isBiologicalRoleUnspecified() { return getBiologicalRoleMi().equals(CvBiologicalRole.UNSPECIFIED_PSI_REF); } }
public boolean isExperimentalRoleUnspecified() { return getExperimentalRoleMi().equals(CvExperimentalRole.UNSPECIFIED_PSI_REF); }
public String getRelevantMi() { if (relevantNameMi != null) { return relevantNameMi; } if (isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantNameMi = CvExperimentalRole.UNSPECIFIED_PSI_REF; } else if (isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantNameMi = getBiologicalRoleMi(); } else if (!isExperimentalRoleUnspecified() && isBiologicalRoleUnspecified()) { relevantNameMi = getExperimentalRoleMi(); } else if (!isExperimentalRoleUnspecified() && !isBiologicalRoleUnspecified()) { relevantNameMi = getExperimentalRoleMi()+ RELEVANT_SEPARATOR +getBiologicalRoleMi(); } return relevantNameMi; }
/** * Creates a wrapper of experimental role and biological role altogether that have methods to output * the meaningful label for both roles * * @param experimentalRole the experimental role to use * @param biologicalRole the biological role to use * @return the object containing both roles */ public static RoleInfo createRoleInfo(CvExperimentalRole experimentalRole, CvBiologicalRole biologicalRole) { return new RoleInfo(biologicalRole, experimentalRole); }