How to use

InteractionDetectionTag

in

uk.ac.ebi.intact.application.dataConversion.psiUpload.model

  return false;
if ( !interactionDetection.equals( experimentDescriptionTag.interactionDetection ) ) {
  return false;

public int hashCode() {
  int result;
  result = shortlabel.hashCode();
  result = 29 * result + fullname.hashCode();
  result = 29 * result + bibRef.hashCode();
  result = 29 * result + hostOrganism.hashCode();
  result = 29 * result + interactionDetection.hashCode();
  result = 29 * result + participantDetection.hashCode();
  result = 29 * result + ( xrefs != null ? xrefs.hashCode() : 0 );
  result = 29 * result + ( annotations != null ? annotations.hashCode() : 0 );
  result = 29 * result + ( additionalBibRef != null ? additionalBibRef.hashCode() : 0 );
  return result;
}

  public static void check( final InteractionDetectionTag interactionDetection ) {

    final XrefTag psiDef = interactionDetection.getPsiDefinition();
    XrefChecker.check( psiDef );

    final String id = psiDef.getId();

    if ( !cache.keySet().contains( id ) ) {
      CvInteraction cvInteraction = null;

      try {
        cvInteraction = IntactContext.getCurrentInstance().getCvContext().getByMiRef(CvInteraction.class,id);

        if ( cvInteraction == null ) {
          MessageHolder.getInstance().addCheckerMessage( new Message( "Could not find CvInteraction by PSI definition: " + id ) );
        } else {
          System.out.println( "Found CvInteraction " + id + " as " + cvInteraction.getShortLabel() );
        }
      } catch ( IntactException e ) {
        MessageHolder.getInstance().addCheckerMessage( new Message( "An error occured while searching for CvInteraction " +
                                      "having the PSI definition: " + id ) );
        e.printStackTrace();
      }

      cache.put( id, cvInteraction );
    }
  }
}

                         CvDatabase.PSI_MI );
try {
  interactionDetection = new InteractionDetectionTag( interactionXref );
} catch ( IllegalArgumentException e ) {
  MessageHolder.getInstance().addParserMessage( new Message( interactionDetectionXrefElement,

  public static void check( final InteractionDetectionTag interactionDetection ) {

    final XrefTag psiDef = interactionDetection.getPsiDefinition();
    XrefChecker.check( psiDef );

    final String id = psiDef.getId();

    if ( !cache.keySet().contains( id ) ) {
      CvInteraction cvInteraction = null;

      try {
        cvInteraction = IntactContext.getCurrentInstance().getCvContext().getByMiRef(CvInteraction.class,id);

        if ( cvInteraction == null ) {
          MessageHolder.getInstance().addCheckerMessage( new Message( "Could not find CvInteraction by PSI definition: " + id ) );
        } else {
          System.out.println( "Found CvInteraction " + id + " as " + cvInteraction.getShortLabel() );
        }
      } catch ( IntactException e ) {
        MessageHolder.getInstance().addCheckerMessage( new Message( "An error occured while searching for CvInteraction " +
                                      "having the PSI definition: " + id ) );
        e.printStackTrace();
      }

      cache.put( id, cvInteraction );
    }
  }
}

                         CvDatabase.PSI_MI );
try {
  interactionDetection = new InteractionDetectionTag( interactionXref );
} catch ( IllegalArgumentException e ) {
  MessageHolder.getInstance().addParserMessage( new Message( interactionDetectionXrefElement,

  public static void check( final InteractionDetectionTag interactionDetection ) {

    final XrefTag psiDef = interactionDetection.getPsiDefinition();
    XrefChecker.check( psiDef );

    final String id = psiDef.getId();

    if ( !cache.keySet().contains( id ) ) {
      CvInteraction cvInteraction = null;

      try {
        cvInteraction = IntactContext.getCurrentInstance().getDataContext().getDaoFactory().getCvObjectDao(CvInteraction.class).getByXref(id);

        if ( cvInteraction == null ) {
          MessageHolder.getInstance().addCheckerMessage( new Message( "Could not find CvInteraction by PSI definition: " + id ) );
        } else {
          System.out.println( "Found CvInteraction " + id + " as " + cvInteraction.getShortLabel() );
        }
      } catch ( IntactException e ) {
        MessageHolder.getInstance().addCheckerMessage( new Message( "An error occured while searching for CvInteraction " +
                                      "having the PSI definition: " + id ) );
        e.printStackTrace();
      }

      cache.put( id, cvInteraction );
    }
  }
}

public int hashCode() {
  int result;
  result = shortlabel.hashCode();
  result = 29 * result + fullname.hashCode();
  result = 29 * result + bibRef.hashCode();
  result = 29 * result + hostOrganism.hashCode();
  result = 29 * result + interactionDetection.hashCode();
  result = 29 * result + participantDetection.hashCode();
  result = 29 * result + ( xrefs != null ? xrefs.hashCode() : 0 );
  result = 29 * result + ( annotations != null ? annotations.hashCode() : 0 );
  result = 29 * result + ( additionalBibRef != null ? additionalBibRef.hashCode() : 0 );
  return result;
}

  return false;
if ( !interactionDetection.equals( experimentDescriptionTag.interactionDetection ) ) {
  return false;

                         CvDatabase.PSI_MI );
try {
  interactionDetection = new InteractionDetectionTag( interactionXref );
} catch ( IllegalArgumentException e ) {
  MessageHolder.getInstance().addParserMessage( new Message( interactionDetectionXrefElement,

final String interactionDetectionId = experimentDescription.getInteractionDetection().getPsiDefinition().getId();
final CvInteraction cvInteraction = InteractionDetectionChecker.getCvInteraction( interactionDetectionId );
experiment.setCvInteraction( cvInteraction );

public int hashCode() {
  int result;
  result = shortlabel.hashCode();
  result = 29 * result + fullname.hashCode();
  result = 29 * result + bibRef.hashCode();
  result = 29 * result + hostOrganism.hashCode();
  result = 29 * result + interactionDetection.hashCode();
  result = 29 * result + participantDetection.hashCode();
  result = 29 * result + ( xrefs != null ? xrefs.hashCode() : 0 );
  result = 29 * result + ( annotations != null ? annotations.hashCode() : 0 );
  result = 29 * result + ( additionalBibRef != null ? additionalBibRef.hashCode() : 0 );
  return result;
}

  return false;
if ( !interactionDetection.equals( experimentDescriptionTag.interactionDetection ) ) {
  return false;

final String interactionDetectionId = experimentDescription.getInteractionDetection().getPsiDefinition().getId();
final CvInteraction cvInteraction = InteractionDetectionChecker.getCvInteraction( interactionDetectionId );
experiment.setCvInteraction( cvInteraction );

final String interactionDetectionId = experimentDescription.getInteractionDetection().getPsiDefinition().getId();
final CvInteraction cvInteraction = InteractionDetectionChecker.getCvInteraction( interactionDetectionId );
experiment.setCvInteraction( cvInteraction );