uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.BioSource2xmlI java code examples

Common ways to obtain BioSource2xmlI

private void myMethod () {
 BioSource2xmlI b =Conversion.psiDownload.xmlGenerator.psi25.BioSource2xmlPSI25 bioSource2xmlPSI25;bioSource2xmlPSI25.getInstance()
Conversion.psiDownload.xmlGenerator.psi1.BioSource2xmlPSI1 bioSource2xmlPSI1;bioSource2xmlPSI1.getInstance()
Conversion.psiDownload.xmlGenerator.psi2.BioSource2xmlPSI2 bioSource2xmlPSI2;bioSource2xmlPSI2.getInstance()
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}

BioSource2xmlFactory.getInstance( session ).createOrganism( session, element, protein.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, element, experiment.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, element, experiment.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, element, experiment.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createOrganism( session, element, protein.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, bioSourceListElement, experiment.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createOrganism( session, element, protein.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, bioSourceListElement, experiment.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createOrganism( session, element, protein.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, bioSourceListElement, experiment.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createOrganism( session, element, protein.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, element, experiment.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createOrganism( session, element, protein.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, element, experiment.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createOrganism( session, element, interactor.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, element, experiment.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createOrganism( session, element, interactor.getBioSource() );

Element hostOrganismList = session.createElement( "hostOrganismList" );
element.appendChild( hostOrganismList );
BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, hostOrganismList, interactor.getBioSource() );

BioSource2xmlFactory.getInstance( session ).createOrganism( session, element, interactor.getBioSource() );

Element hostOrganismList = session.createElement( "hostOrganismList" );
element.appendChild( hostOrganismList );
BioSource2xmlFactory.getInstance( session ).createHostOrganism( session, hostOrganismList, interactor.getBioSource() );

Javadoc

Define a common interface between various implementation of BioSource's XML transformer.

Most used methods

createHostOrganism
Gemerate the XML representation of a hostOrganism based on an IntAct BioSource.
createOrganism
Gemerate the XML representation of an organism based on an IntAct BioSource.

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How to useBioSource2xmlI in uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator

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