How to use

ReferenceSetDao

in

net.sf.taverna.t2.reference

/**
 * {@inheritDoc}
 */
public ReferenceSet getReferenceSet(T2Reference id)
    throws ReferenceSetServiceException {
  checkDao();
  try {
    return referenceSetDao.get(id);
  } catch (DaoException de) {
    throw new ReferenceSetServiceException(de);
  }
}

public boolean delete(T2Reference reference)
    throws ReferenceServiceException {
  checkDao();
  ReferenceSet set=referenceSetDao.get(reference);
  if (set==null) return false;
  return referenceSetDao.delete(set);
}

  public void deleteReferenceSetsForWorkflowRun(String workflowRunId)
      throws ReferenceServiceException {
    checkDao();
    referenceSetDao.deleteReferenceSetsForWFRun(workflowRunId);
  }
}

ReferenceSetImpl rs = new ReferenceSetImpl(
    new HashSet<ExternalReferenceSPI>(), id);
o.store(rs);
ReferenceSet returnedset = o.get(newReference);
System.out.println(returnedset);

  referenceSetDao.store(rsi);
  return rsi;
} catch (DaoException de) {

      "Can't add new references back into existing reference set instance");
referenceSetDao.update(rs);

ReferenceSetImpl rs = new ReferenceSetImpl(
    new HashSet<ExternalReferenceSPI>(), id);
o.store(rs);
ReferenceSet returnedset = o.get(newReference);
System.out.println(returnedset);

  /**
   * {@inheritDoc}
   */
  public ReferenceSet registerReferenceSet(
      Set<ExternalReferenceSPI> references)
      throws ReferenceSetServiceException {
    checkDao();
    checkGenerator();
    ReferenceSetImpl rsi = new ReferenceSetImpl();
    rsi
        .setExternalReferences(new HashSet<ExternalReferenceSPI>(
            references));
    T2Reference id = t2ReferenceGenerator.nextReferenceSetReference();
    rsi.setTypedId(T2ReferenceImpl.getAsImpl(id));
    try {
      referenceSetDao.store(rsi);
      return rsi;
    } catch (DaoException de) {
      throw new ReferenceSetServiceException(de);
    }
  }
}

      "Can't add new references back into existing reference set instance");
referenceSetDao.update(rs);

/**
 * {@inheritDoc}
 */
public ReferenceSet getReferenceSet(T2Reference id)
    throws ReferenceSetServiceException {
  checkDao();
  try {
    return referenceSetDao.get(id);
  } catch (DaoException de) {
    throw new ReferenceSetServiceException(de);
  }
}

  /**
   * {@inheritDoc}
   */
  public ReferenceSet registerReferenceSet(
      Set<ExternalReferenceSPI> references, ReferenceContext context)
      throws ReferenceSetServiceException {
    checkDao();
    checkGenerator();
    context = EmptyReferenceContext.checkContext(context);
    ReferenceSetImpl rsi = new ReferenceSetImpl();
    rsi
        .setExternalReferences(new HashSet<ExternalReferenceSPI>(
            references));
    T2Reference id = getGenerator(context).nextReferenceSetReference();
    rsi.setTypedId(T2ReferenceImpl.getAsImpl(id));
    try {
      referenceSetDao.store(rsi);
      return rsi;
    } catch (DaoException de) {
      throw new ReferenceSetServiceException(de);
    }
  }
}

      "Can't add new references back into existing reference set instance");
referenceSetDao.update(rs);

/**
 * {@inheritDoc}
 */
public ReferenceSet getReferenceSet(T2Reference id)
    throws ReferenceSetServiceException {
  checkDao();
  try {
    return referenceSetDao.get(id);
  } catch (DaoException de) {
    throw new ReferenceSetServiceException(de);
  }
}

  public void run() {
    try {
      ReferenceSet rs = referenceSetDao.get(id);
      callback.referenceSetRetrieved(rs);
    } catch (DaoException de) {
      callback
          .referenceSetRetrievalFailed(new ReferenceSetServiceException(
              de));
    }
  }
};

  public void run() {
    try {
      ReferenceSet rs = referenceSetDao.get(id);
      callback.referenceSetRetrieved(rs);
    } catch (DaoException de) {
      callback
          .referenceSetRetrievalFailed(new ReferenceSetServiceException(
              de));
    }
  }
};

  public void run() {
    try {
      ReferenceSet rs = referenceSetDao.get(id);
      callback.referenceSetRetrieved(rs);
    } catch (DaoException de) {
      callback
          .referenceSetRetrievalFailed(new ReferenceSetServiceException(
              de));
    }
  }
};