How to use

ReferenceSet

in

net.sf.taverna.t2.reference

private FileReference getAsFileReference(ReferenceService referenceService, T2Reference t2Reference) {
  Identified identified = referenceService.resolveIdentifier(t2Reference, null, null);
  if (identified instanceof ReferenceSet) {
    for (ExternalReferenceSPI ref : ((ReferenceSet) identified).getExternalReferences()) {
      if (ref instanceof FileReference) {
        return (FileReference) ref;
      }
    }
  }
  return null;
}

public synchronized boolean delete(ReferenceSet refSet) throws DaoException {
  return store.remove(refSet.getId())!=null;
}

      .getReferenceSetService()
      .getReferenceSet(reference);
  approximateSizeInBytes = refSet.getApproximateSizeInBytes()
      .longValue();
} catch (Exception ex) {

      .getReferenceSetService()
      .getReferenceSet(reference);
  approximateSizeInBytes = refSet.getApproximateSizeInBytes()
      .longValue();
} catch (Exception ex) {

private static SshReference getAsSshReference(ReferenceService referenceService,
    T2Reference t2Reference) {
  Identified identified = referenceService.resolveIdentifier(t2Reference, null, null);
  if (identified instanceof ReferenceSet) {
    for (ExternalReferenceSPI ref : ((ReferenceSet) identified).getExternalReferences()) {
      if (ref instanceof SshReference) {
        SshReference sshRef = (SshReference) ref;
        return sshRef;
      }
    }
  }
  return null;
}

public synchronized void update(ReferenceSet refSet) throws DaoException {
  store.put(refSet.getId(), refSet);		
}

      .getReferenceSetService()
      .getReferenceSet(reference);
  approximateSizeInBytes = refSet.getApproximateSizeInBytes()
      .longValue();
} catch (Exception ex) {

protected InputStream getAsStream(ReferenceService referenceService, T2Reference t2Reference) {
  Identified identified = referenceService.resolveIdentifier(t2Reference, null, null);
  if (identified instanceof ReferenceSet) {
    ExternalReferenceSPI ref = ((ReferenceSet) identified).getExternalReferences().iterator().next();
    return ref.openStream(invocationContext);
  }
  return null;
}

public synchronized void update(ReferenceSet refSet) throws DaoException {
  store.put(refSet.getId(), refSet);		
}

public SshReference getAsSshReference(ReferenceService referenceService,
    T2Reference t2Reference, SshNode workerNode) {
  Identified identified = referenceService.resolveIdentifier(t2Reference, null, null);
  if (identified instanceof ReferenceSet) {
    for (ExternalReferenceSPI ref : ((ReferenceSet) identified).getExternalReferences()) {
      if (ref instanceof SshReference) {
        SshReference sshRef = (SshReference) ref;
        if (sshRef.getHost().equals(workerNode.getHost())) {
          return sshRef;
        }
      }
    }
  }
  return null;
}

public synchronized void store(ReferenceSet refSet) throws DaoException {
  store.put(refSet.getId(), refSet);
}

for (ExternalReferenceSPI er : rs.getExternalReferences()) {
  if (er.getClass().equals(
      translators.get(0).getSourceReferenceType())) {

public synchronized void update(ReferenceSet refSet) throws DaoException {
  store.put(refSet.getId(), refSet);		
}

for (ExternalReferenceSPI er : rs.getExternalReferences()) {
  if (er.getClass().equals(
      translators.get(0).getSourceReferenceType())) {

public synchronized void store(ReferenceSet refSet) throws DaoException {
  store.put(refSet.getId(), refSet);
}

for (ExternalReferenceSPI er : rs.getExternalReferences()) {
  if (er.getClass().equals(translators.get(0).getSourceReferenceType())) {
    currentReference = er;

public synchronized void store(ReferenceSet refSet) throws DaoException {
  store.put(refSet.getId(), refSet);
}

for (ExternalReferenceSPI er : rs.getExternalReferences()) {

@DeleteIdentifiedOperation
public boolean delete(ReferenceSet rs) throws DaoException {
  if (rs.getId() == null) {
    throw new DaoException(
        "Supplied reference set has a null ID, allocate "
            + "an ID before calling the store method in the dao.");
  } else if (rs.getId().getReferenceType().equals(
      T2ReferenceType.ReferenceSet) == false) {
    throw new DaoException(
        "Strangely the reference set ID doesn't have type "
            + "T2ReferenceType.ReferenceSet, something has probably "
            + "gone badly wrong somewhere earlier!");
  }
  if (rs instanceof ReferenceSetImpl) {
    try {
      sessionFactory.getCurrentSession().delete(rs);
    } catch (Exception ex) {
      throw new DaoException(ex);
    }
  } else {
    throw new DaoException(
        "Supplied reference set not an instance of ReferenceSetImpl");
  }
  return true;
}

for (ExternalReferenceSPI er : rs.getExternalReferences()) {