How to use

BrainRegion

in

ch.epfl.bbp.uima.types

/** @generated
 * @param jcas JCas to which this Feature Structure belongs
 * @param begin offset to the begin spot in the SofA
 * @param end offset to the end spot in the SofA 
*/  
public BrainRegion(JCas jcas, int begin, int end) {
 super(jcas);
 setBegin(begin);
 setEnd(end);
 readObject();
}   

  } else if (label.equals(TARGET_O) && begin != null) {
    new BrainRegion(jCas, begin, end).addToIndexes();
    begin = null;
  new BrainRegion(jCas, begin, end).addToIndexes();
new Gold(jCas, brGold.getBegin(), brGold.getEnd())
    .addToIndexes();

  @Override
  public void process(JCas jCas) throws AnalysisEngineProcessException {

    for (BrainRegion br : select(jCas, BrainRegion.class)) {

      BrainRegionDictTerm brdt = new BrainRegionDictTerm(jCas,
          br.getBegin(), br.getEnd());
      brdt.setEntityId(br.getCoveredText().replaceAll("[\r\t\n]", ""));
      brdt.addToIndexes();
    }
  }
}

 public FeatureStructure createFS(int addr, CASImpl cas) {
      if (BrainRegion_Type.this.useExistingInstance) {
       // Return eq fs instance if already created
      FeatureStructure fs = BrainRegion_Type.this.jcas.getJfsFromCaddr(addr);
      if (null == fs) {
       fs = new BrainRegion(addr, BrainRegion_Type.this);
       BrainRegion_Type.this.jcas.putJfsFromCaddr(addr, fs);
       return fs;
      }
      return fs;
  } else return new BrainRegion(addr, BrainRegion_Type.this);
  }
};

  return "BrainRegion[" + b.getCoveredText() + "]";
} else if (o instanceof Concentration) {
  Concentration c = (Concentration) o;

/** Internal - constructor used by generator 
 * @generated
 * @param addr low level Feature Structure reference
 * @param type the type of this Feature Structure 
 */
public BrainRegion(int addr, TOP_Type type) {
 super(addr, type);
 readObject();
}

/** @generated
 * @param jcas JCas to which this Feature Structure belongs 
 */
public BrainRegion(JCas jcas) {
 super(jcas);
 readObject();   
}